Virtual Cell Virtual Cell WebsiteSchool of Health Sciences WebsitePurdue University Website
About the Virtual CellDownload VCExamplesTheoryUser ManualHelpExecute VC Simulation
LPL Model Input File #1
Sample Input Files

Tip: Comments are indicated in blue.  For additional details, click on the keywords highlighted in green. Reasonable default values are specified for all model inputs.

/*
LPL Model Sample Input File: Radiosensitivity parameters correspond to an alpha/beta ratio of 1.62 Gy. The half-time for DSB repair is ~ 2.0 hour.
The entire cell population is in a non-dividing (quiescent) state, i.e., GF=0.
*/
   MODEL: DRM=LPL CKM=QECK         !Model Specification
   CELL: DNA=5.667D+09 NC=46
   IRAD: DSB=25 FL=0.1
   CLRP: LAM=0.347 ETA=2.75E-04 GAM=0.25 B0=0.25
   CCKM: TCC=10 TPOT=20 GF=0.0 N0=1 KAP=1.0D+07 VOL=1
   RBM: KX=6.0E+06 FMAX=1   !Analysis of PFGE data

!  Parameters that impact on solution accuracy
   SOLVER: DBLV=0 ETOL=1.0E-09 MXSS=999999 HMAX=10

!  Parameters that control the time steps and stopping criteria
   SIMCON: FSDX=1 TSAX=5 TCUT=100 FRDL=1.0D+00 ACUT=1.0D-09

!  Define the radiation exposure scenario (2 Gy delivered at 100 Gy/hour)
   RADX: ADR=100 AD=2


School of Health Sciences
Purdue University
Disclaimer

Last updated: 10 June, 2011
Webmaster