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Human_Evol_Trees.pdf Added Jan 2007; Linked here April 2016 | Thompson E.A. (1975) | Human Evolutionary Trees. Cambridge University Press. | Scanned PDF. |
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ahg75_thompson.pdf Added, April 2016 | Thompson E.A. (1975) | The estimation of pairwise relationships. Ann,HumGenet 39: 173-188 | Scanned PDF. |
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tpb83_kp_donnelly.pdf Added, April 2016 (with permission from KPD) | Donnelly, K. P. (1983) | The probability that related individuals share some section of genome identical by descent. Theor.Pop. Biol. 23: 34-63 | Scanned PDF. |
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imaj_crossover_87.ps imaj_crossover_87.pdf Added July 2004 |
Thompson E.A. (1988). | Crossover counts and likelihood in multipoint linkage analysis I.M.A. J. Math. Appl. in Med and Biol. 4: 93-108. (This paper is still requested, but no reprints remain: Only these not-so-good copies could be created from old files) |
PostScript and PDF. No figures. Tables squiffed. |
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imaj_two_three_loc.88.ps.Z imaj_two_three_loc.88.pdf Scanned full print copy Scanned Figure 2: quadruple 2nd cousins |
Thompson E.A. (1988). | Two-locus and three-locus gene identity by descent in pedigrees. I.M.A. J. Math. Appl. in Med and Biol. 5: 261-280. (This paper is still requested, but no reprints remain; Be aware full scanned copy is 11 MB) |
Converted to PDF, and PDF version added, Apr 2010. Also scanned version added, and Figure 2 |
| ascer_rept.93.ps.Z | Thompson, E. A. (1993). | Sampling and ascertainment in genetic epidemiology; a tutorial review. Technical report No. 243, Department of Statistics, University of Washington. | without figures |
| biom_50_years.96.ps.Z | Thompson, E. A. (1996). | Statistical Genetics. Chapter 14 in: Advances in Biometry: The last 50 years. P. Armitage and H. David (eds.) Wiley: New York. Pp. 263-285. | . |
| froyal_genomes.89.ps.Z | Thompson, E. A. (1995). | Genetic importance and genomic descent. In: Population Management for Survival & Recovery. J.D.Ballou, M. Gilpin, and T.J.Foose (eds.) Proceedings of the 1989 Front Royal Workshop on Analytical Methods for Population Viability Analyses Pp. 112-123. Columbia University Press, New York. (This is a paper originally presented at the Front Royal meeting in 1989. The version here is an intermediate version -- the final changes were made only in hard copy.) | . |
| genepi_mcmc_rept.95.ps.Z | Thompson, E. A. (1995). | Monte Carlo in Genetic Analysis. Technical report No. 294, Department of Statistics, University of Washington. Incorporating notes from Wageningen (May 1994) and Copenhagen (May-June, 1995) courses. | Full text, with figures. |
| gibbs_docum.94.ps.Z | Thompson, E.A. (1994). | Monte Carlo programs for Pedigree Analysis.
Technical report No. 267, Department of Statistics,
University of Washington.
The majority of this software is available in the directory PANGAEA/MORGAN_V1.1; for details see readme_pangaea. |
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| imaj_montelik.91.ps.Z | Thompson, E. A. and Guo, S-W. (1991). | Evaluation of likelihood ratios for complex genetic models. I.M.A. J. Math. Appl. Med. & Biol., 8: 149-169. (This paper is still requested, but no reprints remain) | . |
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interface_94.ps.gz interface_94.pdf.gz (PDF file added Nov,2000) |
Thompson, E.A. (1994). | Monte Carlo estimation of multilocus autozygosity probabilities. Proceedings of the 1994 Interface conference J. Sall and A. Lehman (eds.) Pp. 498-506. Interface Foundation of North America: Fairfax Station, VA. | Interface '94 paper; full text as final. gzipped PostScript and PDF files |
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sing4.pdf (PDF file uploaded July 2007) |
Thompson, E.A. (1994). | MCMC in the analysis of genetic data on pedigrees. In Markov Chain Monte Carlo: Innovations and Applications. Pp. 183--216. F. Liang, J-S Wang, and W. Kendall (eds). Lecture Note Series of the IMS, National University of Singapore. World Scientific Co Pte Ltd, Singapore. | Singapore workshop paper; full text as final. PDF file |
Included are two technical reports relating to MCMC in Genetic Analysis. One is a technical report containing program documentation (1993 version), and the other is a 1995 technical report of lecture notes on this topic, based on courses and lectures given at Wageningen (May, 1994), Copenhagen (May 1995), Montreal (June 1995) and Adelaide (August, 1995).
| 2001 Book Chapter; PDF file, August 2016 | Chapman, N, H, and Thompson E. A. (2001) | Linkage disequilibrium mapping: The role of population history, size, and structure. | In Advances in Genetics, Vol 42: Genetic Dissection of Complex Traits D.C.Rao and M.A.Province (eds). Pp. 413--437. Academic Press: San Diego, CA. |
| 2009 ISI paper; PDF file, Sept 2009 | Thompson, E.A. (2009). | Inferring coancestry of genome segments in populations | ISI Invited paper; final version |
| 2011 ISI paper; PDF file, August 2011 | Thompson, E.A. and Glazner, C. G. (2011). | Inferring coancestry of genome segments in populations | ISI contributed paper |
| nih_grant.89.ps.Z | Postscript, Compressed | The genetic epidemiology of complex traits. |
Text of 1989 NIH grant proposal, scientific sections. |
| nih_grant.94.ps.Z | Postscript, Compressed | The genetic epidemiology of complex traits. |
Text of 1994 NIH grant renewal, scientific sections. |
| nih_grant.98.ps.Z | Postscript, Compressed | The genetic epidemiology of complex traits. |
Text of 1998 NIH grant renewal, scientific sections. |
| nih_grant_03.ps.gz | Postscript, gzipped | The genetic epidemiology of complex traits. |
Text of 2003 NIH grant renewal, scientific sections. |
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nih07_science.pdf nih07_literature.pdf |
PDF files | The genetic epidemiology of complex traits. |
Text of 2007 NIH grant renewal, Scientific Sections and Literature Cited. |
| nih09_science.pdf | PDF file | The genetic epidemiology of complex traits: ARRA Supplement. |
Text of 2009 ARRA Supplement Scientific Sections and Literature Cited. See also 2009 ISI paper |
| nih_2011_science.pdf | PDF file | P01 (Weir); Project 4 (Thompson) Resolving complex traits through inferred coancestry of genome segments |
Text of 2011 P01 Project 4 Scientific Sections and Literature Cited. See also 2009 ISI paper |
| merit_2011_science.pdf | PDF file | The genetic epidemiology of complex traits. |
Text of 2012 NIH MERIT Extension report. Scientific Sections and Literature Cited. |
| UW - Statistics: Thursday, 25-Jul-19 | Contact: Elizabeth Thompson <eathomp@u.washington.edu> |