Research Projects

Below is a list of active and recently completed research projects unified by a central focus on environmental memory, regulatory biology, and organismal performance in marine systems. Projects span three intersecting themes: Environmental Epigenetics (01-EE), Reproductive Biology and Ecology (02-RBE), and Aquaculture Resource Development (03-ARD). You can use the filter feature below to search projects based on funding agency.

  • FACT: AquaMine - A High Performance Genomic Data Mining System for Species of Importance to US Aquaculture
    Summary Website Support::USDA

  • Oyster adaptation to climate change via transgenerational plasticity
    Summary Support::AUSTRALIAN RESEARCH COUNCIL

  • Gene activity and genetic selection in Pacific cod reared under thermal stress
    Summary GitHub Repository Support::Pacific States Marine Fishery Commission

  • Understanding the genetics of Alaska's crabs and fish to support a healthy, long term seafood supply
    Summary Support::NOAA

  • Collaborative Research: URoL : Epigenetics 2: Predicting phenotypic and eco-evolutionary consequences of environmental-energetic-epigenetic linkages
    Summary Website GitHub Repository Support::NSF

  • Identifying genomic architecture features that contribute to critical phenotypes in shellfish
    Summary GitHub Repository Support::USDA NRSP-8

  • Biological sensitivity, resiliency, and adaptation to ocean acidification in marine fish species
    Summary Support::NOAA

  • Advancement of innovative approaches to support sustainable aquaculture
    Summary Support::NOAA

  • Development of SORMI (Summer Oyster Resilience and Mortality Index): A Quantitative Tool for Improving Field Survival
    Summary Website GitHub Repository Support::Western Regional Aquaculture Center

  • Improved climate resilience in oysters through optimization of hatchery-based environmental conditioning practices
    Summary GitHub Repository Support::USDA

  • Readying sustainable aquaculture for a changing ocean: uncovering the mechanisms associated with intergenerational carryover effects to enhance bivalve resilience to acidification
    Summary GitHub Repository Support::Washington Sea Grant

  • A collaborative partnership to address mass mortalities in oyster aquaculture through improved field monitoring, husbandry practices, and workforce development
    Summary Support::Washington Sea Grant

  • Effects of temperature change and Hematodinium sp. infection (Bitter Crab Disease) on Tanner crab (Chionoecetes bairdi)
    Summary GitHub Repository Support::North Pacfic Research Board

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