Statistics Machine Learning Astronomy Computational Geometry
Psychology Biology Network Science Dementia Studies

Preprints

*student

Refereed Publications

Measuring Human Activity Spaces With Density Ranking Based on GPS Data
Yen-Chi Chen, Adrian Dobra.
To appear in the Annals of Applied Statistics. R-code: DR
Cognitive trajectory in mild cognitive impairment due to primary age-related tauopathy
Merilee Teylan, Charles Mock, Kathryn Gauthreaux et al.
To appaer in Brain.
Functional Summaries of Persistence Diagrams
Eric Berry, Yen-Chi Chen, Jessi Cisewski, Brittany Terese Fasy.
To appear in the Journal of Applied and Computational Topology.
Oracle Importance Sampling for Stochastic Simulation Models
Yen-Chi Chen, Youngjun Choe.
Electronic Journal of Statistics 13, no. 2 (2019): 3386-3423.
Nonparametric Inference via Bootstrapping the Debiased Estimator
Gang Cheng*, Yen-Chi Chen.
Electronic Journal of Statistics 13, no. 1 (2019): 2194-2256.
Alignment between filaments and galaxy spins from the MaNGA integral-field survey
Alex Krolewski*, Shirley Ho, Yen-Chi Chen, P.F. Chan, Ananth Tenneti, Dmitry Bizyaev, Katarina Kraljic.
The Astrophysical Journal 876, no 1 (2019): 52
Detecting Galaxy-Filament Alignments in the Sloan Digital Sky Survey III
Yen-Chi Chen, Shirley Ho, Jonathan Blazek, Siyu He*, Rachel Mandelbaum, Peter Melchior, Sukhdeep Singh.
Monthly Notices of the Royal Astronomical Society 485, no 2 (2019): 2492-2504.
Clinical diagnoses among individuals with primary age-related tauopathy versus Alzheimers neuropathology
Merilee Teylan, Lilah M. Besser, John F. Crary et al.
Laboratory Investigation (2019): 1.
Generalized Cluster Trees and Singular Measures
Yen-Chi Chen.
The Annals of Statistics 47, no. 4 (2019): 2174-2203.
On the Use of Bootstrap with Variational Inference: Theory, Interpretation, and a Two-sample Test Example
Yen-Chi Chen, Y. Samuel Wang*, Elena Erosheva.
The Annals of Applied Statistics 12, no. 2 (2018): 846-876.
An Analysis Framework for Understanding the Origin of Nuclear Activity in Low-Power Radio Galaxies
Yen-Ting Lin, Hung-Jin Huang*, Yen-Chi Chen.
The Astronomical Journal 155, no. 5 (2018): 188.
Modal Regression using Kernel Density Estimation: a Review
Yen-Chi Chen.
Wiley Interdisciplinary Reviews: Computational Statistics 10, no. 4 (2018): e1431.
Size uniformity of animal cells is actively maintained by a p38 MAPK-dependent regulation of G1-length
Shixuan Liu*, Miriam Bracha Ginzberg, Nish Patel et al.
eLife 7, (2018): p.e26947.
The detection of the imprint of filaments on cosmic microwave background lensingg
Siyu He*, Shadab Alam, Simone Ferraro, Yen-Chi Chen, Shirley Ho.
Nature Astronomy 2, no. 5 (2018): 401.
Intrinsic Alignment in redMaPPer clusters – II. Radial alignment of satellites toward cluster centers
Hung-Jin Huang*, Rachel Mandelbaum, Peter E. Freeman, Yen-Chi Chen et al.
Monthly Notices of the Royal Astronomical Society 474, no. 4 (2017): 4772–4794.
A Tutorial on Kernel Density Estimation and Recent Advances
Yen-Chi Chen.
Biostatistics & Epidemiology 1, no. 1 (2017): 161-187.
Density Level Sets: Asymptotics, Inference, and Visualization
Yen-Chi Chen, Christopher R. Genovese, Larry Wasserman.
Journal of the American Statistical Association 112, (2017): 1684-1696. R-code: HDLV
GraphCom: A Multi-dimensional Measure of Graphic Complexity Applied to 131 Written Languages
Li-Yun Chang, Yen-Chi Chen, Charles Perfetti.
Behavior Research Methods 50, no. 1 (2017): 427–449.
Statistical Inference Using the Morse-Smale Complex
Yen-Chi Chen, Christopher R. Genovese, Larry Wasserman.
Electronic Journal of Statistics 11, no. 1 (2017): 1390-1433. R-code: MSHD
Detecting Effects of Filaments on Galaxy Properties in Sloan Digital Sky Survey III
Yen-Chi Chen, Shirley Ho, Rachel Mandelbaum et al.
Monthly Notices of the Royal Astronomical Society 466, no. 2 (2017): 1880-1893.
Confidence Sets for Density Trees
Jisu Kim*, Yen-Chi Chen, Sivaraman Balakrishnan, Alessandro Rinaldo, Larry Wasserman.
Advances in Neural Information Processing Systems 29 (NIPS 2016), 1831-1839.
Intrinsic Alignment in redMaPPer clusters I. Central Galaxy Alignment
Hung-Jin Huang*, Rachel Mandelbaum, Peter E. Freeman, Yen-Chi Chen et al.
Monthly Notices of the Royal Astronomical Society 463, no. 1 (2016): 222–244.
Cosmic Web Reconstruction through Density Ridges: Catalogue
Yen-Chi Chen, Shirley Ho, Jon Brinkmann et al.
Monthly Notices of the Royal Astronomical Society 461, no. 4 (2016): 3896–3909.
A Comprehensive Approach to Mode Clustering
Yen-Chi Chen, Christopher R. Genovese, Larry Wasserman.
Electronic Journal of Statistics 10, no. 1 (2016): 210-241. R-code: EMC
Non-parametric Modal Regression
Yen-Chi Chen, Christopher R. Genovese, Ryan J. Tibshirani, Larry Wasserman.
The Annals of Statistics 44, no. 2 (2016): 489–514. R-code: ModalRegression
Optimal Ridge Detection using Coverage Risk
Yen-Chi Chen, Christopher R. Genovese, Shirley Ho, Larry Wasserman.
Advances in Neural Information Processing Systems 28 (NIPS 2015), 316-324.
Investigating Galaxy-Filament Alignment in Hydrodynamic Simulations using Density Ridges
Yen-Chi Chen, Shirley Ho, Ananth Tenneti et al.
Monthly Notices of the Royal Astronomical Society 454, no. 3 (2015): 3341–3350.
Cosmic Web Reconstruction through Density Ridges: Method and Algorithm
Yen-Chi Chen, Shirley Ho, Peter E. Freeman, Christopher R. Genovese, Larry Wasserman.
Monthly Notices of the Royal Astronomical Society 454, no. 1 (2015): 1140–1156.
Asymptotic Theory for Density Ridges
Yen-Chi Chen, Christopher R. Genovese, Larry Wasserman.
The Annals of Statistics 43, no. 5 (2015): 1896–1928.
The Eleventh and Twelfth Data Releases of the Sloan Digital Sky Survey: Final Data from SDSS-III
Shadab Alam, Franco D. Albareti, Carlos Allende Prieto et al.
The Astrophysical Journal Supplement Series 219, no. 1 (2015): 12.

Technical Reports

A Note on Community Trees in Networks (2017)
Ruqian Chen*, Yen-Chi Chen, Wei Guo*, Ashis G. Banerjee.
NIPS 2017 Workshop “Synergies in Geometric Data Analysis”.
Statistical Analysis of Persistence Intensity Functions (2015)
Yen-Chi Chen, Daren Wang*, Alexandro Rinaldo, Larry Wasserman.
Risk Bounds for Mode Clustering (2015)
Martin Azizyan, Yen-Chi Chen, Aarti Singh and Larry Wasserman.
Generalized Mode and Ridge Estimation (2014)
Yen-Chi Chen, Christopher R. Genovese, Larry Wasserman.
Uncertainty Measures and Limiting Distributions for Filaments (2013)
Yen-Chi Chen, Christopher R. Genovese, Larry Wasserman.

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