Software
- Details of R package to evaluate methods described in Biometrics paper (paper is here) can be found at HWEBAYES
WinBUGS code for examining Hardy-Weinberg Equilibrium here. R script to run the four allele example from the Biometrics paper here. Short user-manual for this example: here.
- Bayesian population PK/PD modeling developed for BUGS by me, Dave Lunn, Nicky Best and Dave Spiegelhalter:
PKBUGS
- Bugs code for Zhou and Wakefield (2006, Biometrics) paper on curve clustering here
- Excel spreadsheet for calculating approximate Bayes factors for genetic epidemiology studies here
; R code is here.
The paper "A Bayesian Measure of the Probability of False Discovery in Genetic Epidemiology Studies" is on the publications pa
ge.
- The R Code to carry out two-phase sampling in an ecological setting as descibed in "Overcoming ecological bias using the
two-phase study design" by Wakefield and Haneuse, American Journal of Epidemiology (see publications page for more details) is
here, and requires the R functions tps.q - the latter is an R version of th
e Splus code written by Norm Breslow and Nilanjan Chatterjee, details of which can be found at Norm Breslow's website The code works with the North Carolina data
infantsAgg.dat.