---------------------------------------------------- STRUCTURE by Pritchard, Stephens and Donnelly (2000) and Falush, Stephens and Pritchard (2003) Code by Pritchard and Falush Version 2.2 (March 2007) ---------------------------------------------------- Command line arguments: bin/structure -m "/Users/wswanson/Desktop/america/test/mainparams" -e "/Users/wswanson/Desktop/america/test/extraparams" Input File: /Users/wswanson/Desktop/america/project_data Run parameters: 108 individuals 122 loci 2 populations assumed 5000 Burn-in period 100000 Reps -------------------------------------------- Overall proportion of membership of the sample in each of the 2 clusters Inferred Clusters 1 2 0.538 0.462 -------------------------------------------- Allele-freq. divergence among pops (Net nucleotide distance), computed using point estimates of P. 1 2 1 - 0.3196 2 0.3196 - Average distances (expected heterozygosity) between individuals in same cluster: cluster 1 : -1.5915 cluster 2 : -2.2859 -------------------------------------------- Estimated Ln Prob of Data = -29599.4 Mean value of ln likelihood = -29091.9 Variance of ln likelihood = 1015.0 Mean value of alpha = 0.1678 Mean value of Fst_1 = 0.0030 Mean value of Fst_2 = 0.1921 Inferred ancestry of individuals: Label (%Miss) : Inferred clusters 1 995 (7) : 0.052 0.948 2 996 (0) : 0.063 0.937 3 997 (0) : 0.008 0.992 4 998 (3) : 0.053 0.947 5 999 (3) : 0.004 0.996 6 1000 (1) : 0.010 0.990 7 1001 (1) : 0.175 0.825 8 1003 (0) : 0.175 0.825 9 1004 (7) : 0.006 0.994 10 1005 (2) : 0.051 0.949 11 1006 (0) : 0.227 0.773 12 1007 (2) : 0.008 0.992 13 1008 (6) : 0.009 0.991 14 1009 (4) : 0.767 0.233 15 1010 (0) : 0.210 0.790 16 1011 (0) : 0.069 0.931 17 1012 (1) : 0.013 0.987 18 1013 (1) : 0.136 0.864 19 1014 (5) : 0.010 0.990 20 1015 (4) : 0.224 0.776 21 1016 (6) : 0.012 0.988 22 1017 (0) : 0.021 0.979 23 1018 (2) : 0.007 0.993 24 1019 (8) : 0.105 0.895 25 830 (4) : 0.004 0.996 26 832 (0) : 0.022 0.978 27 833 (9) : 0.007 0.993 28 834 (9) : 0.005 0.995 29 835 (1) : 0.006 0.994 30 837 (1) : 0.005 0.995 31 838 (9) : 0.005 0.995 32 839 (9) : 0.005 0.995 33 840 (11) : 0.005 0.995 34 841 (11) : 0.005 0.995 35 842 (12) : 0.007 0.993 36 843 (0) : 0.016 0.984 37 844 (3) : 0.013 0.987 38 845 (4) : 0.241 0.759 39 846 (4) : 0.044 0.956 40 847 (3) : 0.029 0.971 41 848 (4) : 0.041 0.959 42 849 (4) : 0.010 0.990 43 850 (4) : 0.004 0.996 44 851 (3) : 0.005 0.995 45 852 (1) : 0.006 0.994 46 702 (6) : 0.794 0.206 47 703 (0) : 0.958 0.042 48 704 (2) : 0.542 0.458 49 705 (2) : 0.638 0.362 50 706 (3) : 0.506 0.494 51 707 (5) : 0.447 0.553 52 708 (1) : 0.554 0.446 53 709 (2) : 0.429 0.571 54 710 (4) : 0.574 0.426 55 792 (2) : 0.911 0.089 56 793 (5) : 0.898 0.102 57 827 (2) : 0.665 0.335 58 970 (2) : 0.830 0.170 59 854 (9) : 0.877 0.123 60 855 (2) : 0.895 0.105 61 856 (3) : 0.875 0.125 62 857 (5) : 0.726 0.274 63 858 (0) : 0.750 0.250 64 859 (1) : 0.603 0.397 65 860 (2) : 0.985 0.015 66 861 (4) : 0.829 0.171 67 862 (2) : 0.899 0.101 68 863 (2) : 0.973 0.027 69 864 (2) : 0.944 0.056 70 865 (5) : 0.874 0.126 71 866 (0) : 0.876 0.124 72 867 (8) : 0.958 0.042 73 868 (0) : 0.980 0.020 74 869 (3) : 0.811 0.189 75 870 (2) : 0.931 0.069 76 871 (0) : 0.980 0.020 77 872 (1) : 0.949 0.051 78 873 (3) : 0.792 0.208 79 874 (5) : 0.763 0.237 80 875 (11) : 0.897 0.103 81 876 (0) : 0.971 0.029 82 877 (7) : 0.948 0.052 83 878 (4) : 0.892 0.108 84 1037 (5) : 0.994 0.006 85 1038 (3) : 0.995 0.005 86 1039 (6) : 0.994 0.006 87 1040 (4) : 0.993 0.007 88 1041 (4) : 0.933 0.067 89 1042 (5) : 0.982 0.018 90 1043 (3) : 0.984 0.016 91 1044 (5) : 0.990 0.010 92 1045 (1) : 0.991 0.009 93 1046 (2) : 0.981 0.019 94 1047 (0) : 0.948 0.052 95 1048 (5) : 0.995 0.005 96 1049 (0) : 0.990 0.010 97 1050 (0) : 0.995 0.005 98 1051 (0) : 0.989 0.011 99 1052 (1) : 0.993 0.007 100 1053 (1) : 0.977 0.023 101 1054 (1) : 0.975 0.025 102 1055 (4) : 0.967 0.033 103 1056 (2) : 0.973 0.027 104 1057 (2) : 0.991 0.009 105 1058 (1) : 0.987 0.013 106 1059 (0) : 0.921 0.079 107 1060 (0) : 0.994 0.006 108 1061 (0) : 0.989 0.011 Estimated Allele Frequencies in each cluster First column gives estimated ancestral frequencies Locus 1 : 4 alleles 3.7% missing data 120 (0.264) 0.262 0.377 128 (0.046) 0.042 0.104 126 (0.654) 0.663 0.507 122 (0.036) 0.033 0.013 Locus 2 : 8 alleles 1.9% missing data 128 (0.468) 0.472 0.638 124 (0.311) 0.314 0.326 126 (0.074) 0.072 0.028 122 (0.031) 0.030 0.002 130 (0.051) 0.052 0.003 114 (0.031) 0.030 0.002 116 (0.017) 0.015 0.001 120 (0.017) 0.015 0.001 Locus 3 : 10 alleles 7.4% missing data 124 (0.552) 0.564 0.703 146 (0.084) 0.081 0.206 144 (0.126) 0.126 0.048 148 (0.043) 0.042 0.013 142 (0.084) 0.083 0.025 136 (0.017) 0.015 0.001 140 (0.023) 0.022 0.001 128 (0.017) 0.015 0.001 152 (0.031) 0.030 0.002 150 (0.024) 0.022 0.001 Locus 4 : 9 alleles 0.9% missing data 129 (0.594) 0.604 0.746 137 (0.072) 0.072 0.009 135 (0.105) 0.101 0.222 133 (0.065) 0.064 0.013 131 (0.084) 0.086 0.007 139 (0.023) 0.022 0.001 127 (0.023) 0.022 0.001 125 (0.017) 0.014 0.001 141 (0.017) 0.015 0.001 Locus 5 : 7 alleles 3.7% missing data 156 (0.213) 0.211 0.402 142 (0.689) 0.700 0.593 152 (0.016) 0.015 0.001 164 (0.017) 0.015 0.001 144 (0.016) 0.014 0.001 154 (0.024) 0.022 0.001 158 (0.025) 0.023 0.001 Locus 6 : 6 alleles 3.7% missing data 234 (0.425) 0.426 0.403 228 (0.152) 0.147 0.534 232 (0.127) 0.126 0.042 230 (0.147) 0.150 0.011 226 (0.131) 0.135 0.009 240 (0.018) 0.016 0.001 Locus 7 : 10 alleles 0.0% missing data 148 (0.016) 0.013 0.006 142 (0.082) 0.079 0.203 144 (0.024) 0.020 0.020 134 (0.017) 0.013 0.039 146 (0.107) 0.105 0.340 140 (0.312) 0.320 0.283 150 (0.248) 0.256 0.070 138 (0.134) 0.137 0.035 152 (0.036) 0.035 0.002 136 (0.023) 0.021 0.001 Locus 8 : 9 alleles 1.9% missing data 124 (0.193) 0.192 0.375 118 (0.044) 0.042 0.011 112 (0.527) 0.539 0.416 116 (0.092) 0.089 0.189 122 (0.044) 0.044 0.003 120 (0.037) 0.036 0.003 114 (0.016) 0.015 0.001 128 (0.016) 0.014 0.001 126 (0.030) 0.029 0.002 Locus 9 : 5 alleles 4.6% missing data 182 (0.478) 0.482 0.465 186 (0.312) 0.310 0.482 180 (0.105) 0.103 0.047 188 (0.067) 0.068 0.004 190 (0.039) 0.038 0.002 Locus 10 : 4 alleles 2.8% missing data 98 (0.670) 0.672 0.811 96 (0.252) 0.252 0.185 100 (0.053) 0.053 0.003 108 (0.025) 0.023 0.001 Locus 11 : 7 alleles 0.0% missing data 134 (0.040) 0.035 0.092 130 (0.673) 0.682 0.775 140 (0.028) 0.023 0.107 142 (0.141) 0.143 0.019 136 (0.051) 0.051 0.003 132 (0.051) 0.051 0.003 144 (0.016) 0.014 0.001 Locus 12 : 4 alleles 2.8% missing data 120 (0.748) 0.755 0.809 114 (0.199) 0.198 0.165 118 (0.029) 0.025 0.025 122 (0.024) 0.022 0.001 Locus 13 : 5 alleles 0.0% missing data 148 (0.862) 0.871 0.936 146 (0.067) 0.063 0.061 150 (0.038) 0.037 0.002 156 (0.017) 0.015 0.001 168 (0.016) 0.014 0.001 Locus 14 : 5 alleles 0.9% missing data 217 (0.657) 0.665 0.546 227 (0.208) 0.206 0.290 223 (0.039) 0.034 0.157 225 (0.065) 0.066 0.004 219 (0.031) 0.029 0.002 Locus 15 : 7 alleles 0.9% missing data 258 (0.535) 0.536 0.864 260 (0.094) 0.091 0.087 250 (0.089) 0.087 0.028 262 (0.093) 0.095 0.010 264 (0.128) 0.132 0.008 256 (0.016) 0.014 0.001 254 (0.045) 0.044 0.002 Locus 16 : 5 alleles 1.9% missing data 241 (0.154) 0.157 0.016 235 (0.072) 0.068 0.246 233 (0.319) 0.322 0.243 229 (0.286) 0.288 0.244 231 (0.169) 0.166 0.251 Locus 17 : 10 alleles 0.0% missing data 171 (0.035) 0.031 0.057 165 (0.109) 0.106 0.432 163 (0.159) 0.163 0.054 173 (0.436) 0.453 0.140 169 (0.041) 0.038 0.049 147 (0.095) 0.099 0.006 161 (0.020) 0.017 0.012 175 (0.048) 0.044 0.128 177 (0.039) 0.035 0.120 179 (0.016) 0.014 0.001 Locus 18 : 6 alleles 3.7% missing data 175 (0.022) 0.017 0.047 165 (0.671) 0.674 0.917 171 (0.050) 0.047 0.020 167 (0.120) 0.123 0.008 163 (0.090) 0.092 0.006 169 (0.046) 0.046 0.002 Locus 19 : 6 alleles 4.6% missing data 218 (0.764) 0.772 0.961 220 (0.098) 0.099 0.012 214 (0.062) 0.060 0.013 224 (0.026) 0.022 0.010 216 (0.033) 0.031 0.003 222 (0.017) 0.015 0.001 Locus 20 : 6 alleles 15.7% missing data 198 (0.139) 0.134 0.451 194 (0.467) 0.473 0.430 196 (0.237) 0.242 0.052 190 (0.044) 0.042 0.008 188 (0.094) 0.092 0.059 186 (0.019) 0.017 0.001 Locus 21 : 8 alleles 5.6% missing data 183 (0.071) 0.068 0.143 175 (0.261) 0.266 0.185 189 (0.040) 0.036 0.035 187 (0.311) 0.314 0.517 191 (0.129) 0.130 0.061 193 (0.126) 0.126 0.056 177 (0.038) 0.037 0.002 185 (0.024) 0.022 0.001 Locus 22 : 7 alleles 7.4% missing data 143 (0.370) 0.372 0.676 145 (0.163) 0.164 0.073 141 (0.038) 0.034 0.039 149 (0.237) 0.240 0.138 147 (0.156) 0.157 0.072 151 (0.018) 0.016 0.001 133 (0.018) 0.016 0.001 Locus 23 : 10 alleles 0.9% missing data 251 (0.071) 0.068 0.070 249 (0.197) 0.198 0.400 247 (0.297) 0.307 0.115 241 (0.019) 0.015 0.057 245 (0.074) 0.071 0.117 243 (0.265) 0.270 0.237 255 (0.023) 0.021 0.001 253 (0.016) 0.014 0.001 233 (0.016) 0.014 0.001 237 (0.023) 0.022 0.001 Locus 24 : 9 alleles 5.6% missing data 134 (0.334) 0.337 0.486 132 (0.311) 0.313 0.443 136 (0.080) 0.080 0.015 144 (0.024) 0.020 0.036 128 (0.100) 0.103 0.009 130 (0.023) 0.022 0.003 140 (0.093) 0.096 0.006 146 (0.017) 0.015 0.001 142 (0.016) 0.014 0.001 Locus 25 : 9 alleles 1.9% missing data 230 (0.107) 0.102 0.526 228 (0.213) 0.212 0.338 226 (0.113) 0.112 0.033 204 (0.318) 0.326 0.090 224 (0.120) 0.125 0.007 222 (0.040) 0.039 0.002 218 (0.025) 0.023 0.001 232 (0.047) 0.047 0.002 234 (0.017) 0.015 0.001 Locus 26 : 9 alleles 12.0% missing data 200 (0.141) 0.138 0.458 184 (0.583) 0.597 0.375 202 (0.031) 0.030 0.004 186 (0.137) 0.139 0.029 196 (0.017) 0.013 0.011 206 (0.019) 0.015 0.120 208 (0.038) 0.038 0.002 188 (0.017) 0.015 0.001 198 (0.017) 0.015 0.001 Locus 27 : 10 alleles 0.0% missing data 188 (0.465) 0.470 0.667 200 (0.083) 0.080 0.076 190 (0.115) 0.112 0.234 186 (0.044) 0.043 0.002 192 (0.064) 0.064 0.007 204 (0.063) 0.064 0.004 210 (0.023) 0.021 0.001 194 (0.016) 0.014 0.001 206 (0.063) 0.065 0.003 208 (0.064) 0.065 0.004 Locus 28 : 9 alleles 1.9% missing data 146 (0.354) 0.360 0.267 144 (0.100) 0.096 0.315 134 (0.175) 0.174 0.284 138 (0.211) 0.214 0.124 136 (0.031) 0.030 0.002 148 (0.045) 0.045 0.003 150 (0.017) 0.015 0.001 142 (0.051) 0.052 0.003 140 (0.016) 0.014 0.001 Locus 29 : 6 alleles 1.9% missing data 141 (0.094) 0.088 0.479 119 (0.592) 0.599 0.450 139 (0.257) 0.261 0.068 121 (0.017) 0.015 0.001 137 (0.024) 0.023 0.001 147 (0.016) 0.014 0.001 Locus 30 : 9 alleles 9.3% missing data 207 (0.307) 0.312 0.544 199 (0.350) 0.360 0.205 193 (0.025) 0.022 0.008 205 (0.119) 0.118 0.120 201 (0.062) 0.060 0.025 209 (0.037) 0.033 0.054 203 (0.061) 0.058 0.040 211 (0.024) 0.022 0.002 195 (0.017) 0.015 0.001 Locus 31 : 3 alleles 3.7% missing data 183 (0.885) 0.891 0.743 174 (0.091) 0.086 0.256 189 (0.025) 0.023 0.001 Locus 32 : 8 alleles 0.9% missing data 182 (0.182) 0.183 0.159 172 (0.188) 0.189 0.220 176 (0.296) 0.300 0.360 180 (0.179) 0.181 0.087 174 (0.055) 0.052 0.052 178 (0.042) 0.038 0.119 184 (0.029) 0.028 0.001 186 (0.030) 0.029 0.002 Locus 33 : 5 alleles 0.9% missing data 158 (0.414) 0.409 0.808 154 (0.420) 0.431 0.051 162 (0.073) 0.068 0.135 148 (0.076) 0.077 0.005 156 (0.017) 0.015 0.001 Locus 34 : 10 alleles 5.6% missing data 173 (0.300) 0.305 0.305 163 (0.049) 0.045 0.185 169 (0.154) 0.154 0.126 171 (0.079) 0.075 0.297 177 (0.024) 0.021 0.008 175 (0.108) 0.107 0.056 159 (0.016) 0.014 0.003 165 (0.210) 0.220 0.017 167 (0.024) 0.022 0.001 161 (0.037) 0.037 0.002 Locus 35 : 11 alleles 0.9% missing data 104 (0.130) 0.128 0.109 102 (0.067) 0.061 0.695 106 (0.063) 0.059 0.085 98 (0.137) 0.139 0.023 100 (0.191) 0.193 0.060 110 (0.096) 0.099 0.010 108 (0.043) 0.043 0.002 112 (0.036) 0.035 0.002 94 (0.178) 0.186 0.010 96 (0.036) 0.035 0.002 92 (0.023) 0.021 0.001 Locus 36 : 5 alleles 0.0% missing data 166 (0.520) 0.523 0.581 172 (0.401) 0.403 0.415 174 (0.024) 0.022 0.001 176 (0.024) 0.022 0.001 168 (0.031) 0.030 0.001 Locus 37 : 6 alleles 24.1% missing data 120 (0.523) 0.532 0.462 132 (0.033) 0.029 0.254 130 (0.199) 0.200 0.132 128 (0.094) 0.091 0.089 118 (0.019) 0.015 0.034 126 (0.132) 0.134 0.029 Locus 38 : 9 alleles 1.9% missing data 149 (0.019) 0.014 0.079 147 (0.279) 0.284 0.186 173 (0.149) 0.149 0.123 145 (0.396) 0.401 0.602 171 (0.030) 0.029 0.002 143 (0.078) 0.080 0.005 175 (0.016) 0.014 0.001 167 (0.016) 0.014 0.001 169 (0.016) 0.014 0.001 Locus 39 : 7 alleles 0.0% missing data 170 (0.258) 0.259 0.296 166 (0.163) 0.160 0.367 172 (0.152) 0.150 0.250 168 (0.335) 0.346 0.075 164 (0.059) 0.058 0.011 176 (0.017) 0.015 0.001 162 (0.016) 0.014 0.001 Locus 40 : 4 alleles 6.5% missing data 180 (0.389) 0.389 0.469 174 (0.299) 0.297 0.418 182 (0.273) 0.276 0.111 176 (0.039) 0.038 0.002 Locus 41 : 2 alleles 4.6% missing data 208 (0.495) 0.492 0.729 212 (0.505) 0.508 0.271 Locus 42 : 4 alleles 0.0% missing data 188 (0.404) 0.408 0.248 182 (0.107) 0.102 0.339 191 (0.124) 0.121 0.128 185 (0.366) 0.369 0.285 Locus 43 : 6 alleles 6.5% missing data 249 (0.466) 0.475 0.330 246 (0.225) 0.227 0.189 255 (0.145) 0.146 0.063 252 (0.061) 0.058 0.026 261 (0.036) 0.031 0.167 258 (0.068) 0.063 0.225 Locus 44 : 4 alleles 0.9% missing data 115 (0.941) 0.947 0.997 124 (0.024) 0.022 0.001 121 (0.017) 0.015 0.001 118 (0.017) 0.015 0.001 Locus 45 : 7 alleles 0.9% missing data 141 (0.470) 0.474 0.649 153 (0.145) 0.144 0.089 150 (0.242) 0.243 0.216 156 (0.078) 0.080 0.005 159 (0.019) 0.014 0.039 147 (0.030) 0.029 0.002 144 (0.016) 0.014 0.001 Locus 46 : 5 alleles 12.0% missing data 120 (0.250) 0.247 0.477 108 (0.546) 0.557 0.204 105 (0.112) 0.108 0.255 126 (0.037) 0.032 0.060 129 (0.055) 0.055 0.003 Locus 47 : 6 alleles 5.6% missing data 234 (0.480) 0.484 0.440 225 (0.183) 0.180 0.376 228 (0.062) 0.062 0.007 231 (0.107) 0.103 0.166 240 (0.084) 0.086 0.005 237 (0.084) 0.085 0.005 Locus 48 : 6 alleles 4.6% missing data 242 (0.220) 0.215 0.678 239 (0.477) 0.487 0.150 245 (0.167) 0.164 0.165 236 (0.025) 0.024 0.001 224 (0.085) 0.086 0.005 230 (0.025) 0.024 0.001 Locus 49 : 8 alleles 6.5% missing data 271 (0.555) 0.566 0.667 274 (0.215) 0.216 0.204 268 (0.016) 0.014 0.001 277 (0.105) 0.104 0.077 262 (0.018) 0.013 0.045 283 (0.024) 0.022 0.002 265 (0.050) 0.051 0.003 280 (0.016) 0.014 0.001 Locus 50 : 8 alleles 15.7% missing data 195 (0.430) 0.439 0.522 210 (0.121) 0.120 0.178 207 (0.107) 0.106 0.107 198 (0.041) 0.038 0.016 213 (0.078) 0.076 0.041 201 (0.112) 0.112 0.067 216 (0.093) 0.092 0.068 204 (0.019) 0.017 0.001 Locus 51 : 6 alleles 6.5% missing data 221 (0.655) 0.663 0.746 239 (0.234) 0.234 0.231 236 (0.052) 0.049 0.020 224 (0.025) 0.024 0.001 230 (0.018) 0.016 0.001 242 (0.017) 0.015 0.001 Locus 52 : 4 alleles 1.9% missing data 111 (0.225) 0.223 0.276 96 (0.734) 0.740 0.722 102 (0.024) 0.022 0.001 120 (0.017) 0.015 0.001 Locus 53 : 6 alleles 0.9% missing data 117 (0.605) 0.614 0.638 126 (0.183) 0.183 0.181 129 (0.102) 0.099 0.146 132 (0.062) 0.059 0.033 138 (0.031) 0.030 0.002 123 (0.016) 0.014 0.001 Locus 54 : 6 alleles 2.8% missing data 236 (0.342) 0.343 0.570 233 (0.375) 0.383 0.153 239 (0.036) 0.032 0.039 230 (0.206) 0.205 0.235 218 (0.024) 0.022 0.001 227 (0.017) 0.015 0.001 Locus 55 : 5 alleles 0.9% missing data 208 (0.168) 0.165 0.237 199 (0.133) 0.131 0.165 205 (0.154) 0.152 0.161 196 (0.514) 0.521 0.436 202 (0.031) 0.030 0.002 Locus 56 : 8 alleles 4.6% missing data 294 (0.293) 0.290 0.800 288 (0.055) 0.051 0.090 291 (0.204) 0.207 0.051 306 (0.187) 0.189 0.044 309 (0.077) 0.078 0.005 303 (0.017) 0.015 0.001 297 (0.150) 0.155 0.009 300 (0.017) 0.015 0.001 Locus 57 : 6 alleles 12.0% missing data 193 (0.030) 0.025 0.044 190 (0.440) 0.443 0.460 187 (0.329) 0.328 0.484 184 (0.164) 0.170 0.010 181 (0.019) 0.017 0.001 196 (0.019) 0.017 0.001 Locus 58 : 4 alleles 11.1% missing data 116 (0.567) 0.575 0.267 113 (0.306) 0.302 0.675 104 (0.076) 0.072 0.055 107 (0.051) 0.050 0.003 Locus 59 : 6 alleles 0.0% missing data 95 (0.721) 0.724 0.977 101 (0.040) 0.037 0.008 98 (0.125) 0.128 0.008 89 (0.031) 0.029 0.002 86 (0.052) 0.052 0.003 107 (0.031) 0.030 0.001 Locus 60 : 7 alleles 1.9% missing data 238 (0.269) 0.270 0.341 256 (0.204) 0.204 0.269 241 (0.404) 0.411 0.348 253 (0.045) 0.041 0.037 259 (0.038) 0.037 0.003 244 (0.024) 0.022 0.001 235 (0.017) 0.015 0.001 Locus 61 : 5 alleles 0.9% missing data 192 (0.709) 0.709 0.974 195 (0.154) 0.156 0.016 198 (0.046) 0.045 0.003 189 (0.067) 0.067 0.006 186 (0.024) 0.022 0.001 Locus 62 : 7 alleles 1.9% missing data 127 (0.582) 0.589 0.634 121 (0.116) 0.113 0.192 130 (0.041) 0.036 0.073 124 (0.020) 0.016 0.087 133 (0.137) 0.143 0.008 118 (0.045) 0.045 0.002 136 (0.058) 0.059 0.003 Locus 63 : 7 alleles 4.6% missing data 144 (0.249) 0.250 0.295 141 (0.121) 0.118 0.241 132 (0.388) 0.392 0.420 138 (0.192) 0.196 0.042 147 (0.017) 0.015 0.001 135 (0.017) 0.015 0.001 126 (0.017) 0.015 0.001 Locus 64 : 5 alleles 3.7% missing data 113 (0.423) 0.423 0.720 116 (0.230) 0.236 0.030 122 (0.133) 0.131 0.076 119 (0.196) 0.195 0.174 131 (0.018) 0.016 0.001 Locus 65 : 5 alleles 1.9% missing data 163 (0.642) 0.654 0.431 169 (0.018) 0.014 0.040 157 (0.054) 0.050 0.226 160 (0.095) 0.092 0.208 166 (0.190) 0.191 0.095 Locus 66 : 8 alleles 4.6% missing data 156 (0.351) 0.356 0.490 150 (0.328) 0.332 0.374 144 (0.023) 0.019 0.067 159 (0.077) 0.076 0.021 162 (0.024) 0.021 0.011 141 (0.074) 0.073 0.027 153 (0.065) 0.066 0.004 147 (0.057) 0.058 0.004 Locus 67 : 7 alleles 11.1% missing data 263 (0.084) 0.080 0.384 257 (0.066) 0.062 0.114 251 (0.412) 0.419 0.279 260 (0.068) 0.069 0.005 239 (0.081) 0.079 0.076 266 (0.270) 0.277 0.061 254 (0.020) 0.015 0.081 Locus 68 : 5 alleles 1.9% missing data 237 (0.252) 0.251 0.289 234 (0.267) 0.269 0.192 249 (0.043) 0.039 0.121 246 (0.422) 0.427 0.397 240 (0.017) 0.015 0.001 Locus 69 : 5 alleles 3.7% missing data 91 (0.693) 0.696 0.917 79 (0.067) 0.063 0.054 88 (0.091) 0.092 0.009 94 (0.125) 0.126 0.020 76 (0.025) 0.023 0.001 Locus 70 : 7 alleles 0.9% missing data 132 (0.388) 0.391 0.346 126 (0.206) 0.201 0.591 135 (0.145) 0.150 0.009 129 (0.096) 0.094 0.043 123 (0.095) 0.097 0.006 141 (0.024) 0.022 0.002 120 (0.045) 0.045 0.002 Locus 71 : 5 alleles 0.9% missing data 266 (0.117) 0.113 0.271 257 (0.276) 0.274 0.390 260 (0.385) 0.387 0.325 263 (0.205) 0.212 0.013 254 (0.017) 0.015 0.001 Locus 72 : 5 alleles 0.9% missing data 110 (0.267) 0.266 0.308 107 (0.489) 0.491 0.640 113 (0.110) 0.108 0.044 101 (0.103) 0.105 0.007 116 (0.031) 0.029 0.002 Locus 73 : 6 alleles 3.7% missing data 155 (0.753) 0.764 0.776 158 (0.133) 0.130 0.147 161 (0.030) 0.025 0.071 152 (0.031) 0.029 0.003 164 (0.037) 0.036 0.002 146 (0.017) 0.015 0.001 Locus 74 : 5 alleles 0.0% missing data 157 (0.766) 0.773 0.865 151 (0.148) 0.146 0.129 154 (0.045) 0.044 0.004 160 (0.024) 0.022 0.001 166 (0.017) 0.015 0.001 Locus 75 : 6 alleles 5.6% missing data 121 (0.039) 0.037 0.008 109 (0.180) 0.181 0.150 118 (0.032) 0.028 0.056 115 (0.283) 0.286 0.292 112 (0.231) 0.233 0.274 106 (0.233) 0.235 0.219 Locus 76 : 4 alleles 7.4% missing data 165 (0.471) 0.467 0.794 156 (0.171) 0.167 0.175 162 (0.316) 0.324 0.029 168 (0.042) 0.042 0.002 Locus 77 : 7 alleles 0.9% missing data 228 (0.353) 0.350 0.731 240 (0.283) 0.282 0.251 249 (0.069) 0.069 0.005 252 (0.032) 0.030 0.002 234 (0.215) 0.223 0.010 225 (0.024) 0.023 0.001 243 (0.024) 0.023 0.001 Locus 78 : 5 alleles 0.9% missing data 155 (0.211) 0.206 0.640 152 (0.704) 0.719 0.269 158 (0.042) 0.037 0.052 149 (0.020) 0.015 0.037 140 (0.024) 0.022 0.001 Locus 79 : 6 alleles 8.3% missing data 205 (0.037) 0.032 0.111 190 (0.763) 0.774 0.819 202 (0.098) 0.096 0.061 199 (0.024) 0.022 0.004 196 (0.017) 0.015 0.001 187 (0.060) 0.061 0.004 Locus 80 : 5 alleles 0.0% missing data 133 (0.264) 0.260 0.638 136 (0.041) 0.037 0.033 130 (0.618) 0.628 0.325 127 (0.060) 0.060 0.004 121 (0.017) 0.015 0.001 Locus 81 : 5 alleles 14.8% missing data 196 (0.046) 0.043 0.010 193 (0.401) 0.397 0.685 187 (0.221) 0.218 0.283 190 (0.204) 0.210 0.012 178 (0.129) 0.132 0.010 Locus 82 : 6 alleles 0.9% missing data 107 (0.050) 0.046 0.091 104 (0.763) 0.776 0.645 98 (0.081) 0.077 0.252 110 (0.044) 0.043 0.008 113 (0.038) 0.037 0.003 101 (0.024) 0.022 0.001 Locus 83 : 8 alleles 3.7% missing data 143 (0.130) 0.128 0.206 140 (0.049) 0.045 0.104 146 (0.237) 0.243 0.110 137 (0.320) 0.326 0.329 134 (0.123) 0.122 0.183 131 (0.108) 0.108 0.067 128 (0.016) 0.014 0.001 125 (0.016) 0.015 0.001 Locus 84 : 5 alleles 1.9% missing data 136 (0.299) 0.299 0.365 133 (0.588) 0.596 0.436 130 (0.051) 0.046 0.194 139 (0.038) 0.037 0.004 127 (0.024) 0.022 0.001 Locus 85 : 6 alleles 7.4% missing data 205 (0.635) 0.643 0.701 202 (0.286) 0.287 0.287 208 (0.018) 0.015 0.008 214 (0.025) 0.024 0.001 193 (0.018) 0.016 0.001 190 (0.018) 0.016 0.001 Locus 86 : 8 alleles 2.8% missing data 243 (0.414) 0.421 0.352 228 (0.094) 0.091 0.110 246 (0.347) 0.349 0.529 252 (0.031) 0.030 0.002 237 (0.051) 0.051 0.003 240 (0.030) 0.029 0.001 255 (0.016) 0.014 0.001 249 (0.017) 0.015 0.001 Locus 87 : 5 alleles 5.6% missing data 244 (0.584) 0.586 0.827 241 (0.240) 0.241 0.138 247 (0.087) 0.085 0.030 227 (0.064) 0.064 0.004 238 (0.026) 0.024 0.001 Locus 88 : 6 alleles 1.9% missing data 142 (0.174) 0.170 0.370 139 (0.305) 0.306 0.322 151 (0.061) 0.056 0.196 145 (0.039) 0.038 0.002 148 (0.404) 0.414 0.108 154 (0.017) 0.015 0.001 Locus 89 : 6 alleles 0.0% missing data 179 (0.569) 0.578 0.627 188 (0.019) 0.014 0.108 176 (0.016) 0.014 0.002 182 (0.209) 0.210 0.153 184 (0.158) 0.158 0.086 185 (0.029) 0.025 0.024 Locus 90 : 8 alleles 4.6% missing data 166 (0.190) 0.190 0.188 163 (0.043) 0.040 0.017 160 (0.554) 0.565 0.461 154 (0.044) 0.039 0.164 172 (0.019) 0.015 0.161 169 (0.081) 0.083 0.005 175 (0.017) 0.015 0.001 148 (0.052) 0.052 0.003 Locus 91 : 8 alleles 7.4% missing data 194 (0.402) 0.407 0.388 179 (0.171) 0.168 0.534 200 (0.162) 0.164 0.046 197 (0.172) 0.176 0.028 206 (0.025) 0.023 0.001 191 (0.018) 0.016 0.001 203 (0.032) 0.031 0.002 185 (0.018) 0.016 0.001 Locus 92 : 4 alleles 0.0% missing data 156 (0.298) 0.300 0.105 150 (0.515) 0.511 0.881 153 (0.163) 0.167 0.013 159 (0.024) 0.022 0.001 Locus 93 : 6 alleles 3.7% missing data 184 (0.693) 0.699 0.863 190 (0.195) 0.195 0.130 181 (0.039) 0.038 0.002 187 (0.031) 0.030 0.002 196 (0.025) 0.023 0.001 193 (0.017) 0.015 0.001 Locus 94 : 8 alleles 1.9% missing data 247 (0.492) 0.502 0.531 238 (0.098) 0.095 0.199 241 (0.154) 0.155 0.115 235 (0.132) 0.132 0.102 244 (0.041) 0.037 0.031 229 (0.018) 0.014 0.019 250 (0.023) 0.022 0.001 253 (0.043) 0.043 0.002 Locus 95 : 6 alleles 0.9% missing data 135 (0.335) 0.336 0.531 126 (0.492) 0.502 0.200 141 (0.040) 0.036 0.033 132 (0.057) 0.053 0.232 129 (0.037) 0.037 0.002 138 (0.038) 0.037 0.002 Locus 96 : 8 alleles 6.5% missing data 172 (0.167) 0.163 0.442 193 (0.322) 0.327 0.110 190 (0.156) 0.155 0.094 196 (0.062) 0.057 0.336 187 (0.062) 0.063 0.004 199 (0.070) 0.071 0.005 181 (0.144) 0.149 0.009 184 (0.018) 0.015 0.001 Locus 97 : 4 alleles 2.8% missing data 252 (0.092) 0.092 0.011 246 (0.573) 0.573 0.824 249 (0.310) 0.312 0.164 261 (0.025) 0.023 0.001 Locus 98 : 3 alleles 0.0% missing data 200 (0.685) 0.689 0.630 197 (0.284) 0.281 0.369 194 (0.031) 0.030 0.002 Locus 99 : 4 alleles 2.8% missing data 119 (0.806) 0.815 0.845 122 (0.085) 0.081 0.072 113 (0.078) 0.074 0.081 128 (0.031) 0.030 0.002 Locus 100 : 5 alleles 0.9% missing data 156 (0.368) 0.367 0.635 148 (0.050) 0.046 0.071 140 (0.203) 0.204 0.085 152 (0.334) 0.338 0.207 160 (0.045) 0.044 0.003 Locus 101 : 3 alleles 10.2% missing data 254 (0.364) 0.365 0.377 246 (0.596) 0.600 0.510 250 (0.040) 0.035 0.113 Locus 102 : 4 alleles 0.9% missing data 201 (0.559) 0.563 0.474 197 (0.315) 0.313 0.458 193 (0.019) 0.015 0.059 205 (0.107) 0.109 0.009 Locus 103 : 8 alleles 3.7% missing data 202 (0.356) 0.357 0.643 198 (0.274) 0.276 0.235 186 (0.019) 0.014 0.049 210 (0.017) 0.015 0.002 206 (0.060) 0.056 0.052 166 (0.096) 0.099 0.008 194 (0.133) 0.138 0.008 190 (0.046) 0.045 0.002 Locus 104 : 6 alleles 0.9% missing data 162 (0.176) 0.175 0.213 158 (0.400) 0.404 0.423 166 (0.295) 0.296 0.327 178 (0.040) 0.036 0.033 174 (0.016) 0.014 0.001 182 (0.072) 0.074 0.004 Locus 105 : 5 alleles 0.9% missing data 166 (0.092) 0.090 0.058 162 (0.524) 0.527 0.623 170 (0.271) 0.271 0.310 174 (0.096) 0.098 0.008 178 (0.017) 0.015 0.001 Locus 106 : 7 alleles 4.6% missing data 259 (0.198) 0.200 0.172 251 (0.252) 0.253 0.428 267 (0.021) 0.017 0.060 263 (0.096) 0.095 0.075 255 (0.225) 0.228 0.164 247 (0.191) 0.194 0.101 235 (0.016) 0.014 0.001 Locus 107 : 7 alleles 1.9% missing data 185 (0.395) 0.401 0.322 181 (0.368) 0.371 0.564 189 (0.150) 0.150 0.103 177 (0.016) 0.013 0.008 193 (0.024) 0.022 0.001 201 (0.017) 0.015 0.001 197 (0.030) 0.029 0.001 Locus 108 : 6 alleles 1.9% missing data 127 (0.303) 0.304 0.484 119 (0.222) 0.224 0.154 123 (0.153) 0.152 0.175 131 (0.220) 0.224 0.079 135 (0.078) 0.074 0.108 139 (0.023) 0.022 0.001 Locus 109 : 10 alleles 7.4% missing data 342 (0.083) 0.080 0.227 322 (0.059) 0.055 0.195 330 (0.036) 0.032 0.202 338 (0.243) 0.248 0.184 358 (0.022) 0.019 0.011 326 (0.168) 0.170 0.089 334 (0.233) 0.240 0.081 350 (0.059) 0.060 0.006 318 (0.030) 0.030 0.002 346 (0.066) 0.068 0.004 Locus 110 : 4 alleles 5.6% missing data 180 (0.074) 0.069 0.179 168 (0.195) 0.194 0.158 176 (0.595) 0.602 0.558 172 (0.136) 0.134 0.105 Locus 111 : 10 alleles 3.7% missing data 196 (0.158) 0.157 0.257 190 (0.268) 0.270 0.367 188 (0.184) 0.186 0.104 192 (0.060) 0.056 0.217 200 (0.060) 0.057 0.038 194 (0.195) 0.206 0.012 198 (0.025) 0.023 0.001 204 (0.017) 0.015 0.002 184 (0.017) 0.015 0.001 186 (0.017) 0.015 0.001 Locus 112 : 6 alleles 3.7% missing data 207 (0.199) 0.198 0.293 203 (0.397) 0.400 0.489 199 (0.117) 0.116 0.100 211 (0.029) 0.026 0.010 195 (0.204) 0.209 0.039 191 (0.054) 0.050 0.069 Locus 113 : 10 alleles 1.9% missing data 182 (0.055) 0.051 0.153 180 (0.329) 0.336 0.340 184 (0.077) 0.075 0.074 178 (0.280) 0.285 0.365 174 (0.117) 0.117 0.060 172 (0.030) 0.029 0.002 168 (0.043) 0.043 0.003 194 (0.030) 0.029 0.002 176 (0.023) 0.021 0.001 158 (0.016) 0.014 0.001 Locus 114 : 5 alleles 0.9% missing data 164 (0.171) 0.165 0.432 152 (0.145) 0.140 0.291 156 (0.308) 0.307 0.254 168 (0.119) 0.122 0.007 160 (0.257) 0.265 0.016 Locus 115 : 5 alleles 0.0% missing data 198 (0.099) 0.095 0.161 190 (0.378) 0.378 0.624 206 (0.157) 0.159 0.021 202 (0.335) 0.338 0.192 210 (0.031) 0.030 0.001 Locus 116 : 5 alleles 0.9% missing data 135 (0.087) 0.083 0.205 143 (0.387) 0.389 0.456 147 (0.205) 0.203 0.252 139 (0.269) 0.273 0.082 151 (0.052) 0.052 0.003 Locus 117 : 5 alleles 2.8% missing data 232 (0.032) 0.026 0.343 244 (0.496) 0.500 0.414 240 (0.323) 0.328 0.098 248 (0.112) 0.109 0.141 236 (0.038) 0.037 0.003 Locus 118 : 5 alleles 0.9% missing data 198 (0.254) 0.255 0.218 194 (0.555) 0.563 0.395 206 (0.030) 0.026 0.075 202 (0.109) 0.105 0.308 190 (0.052) 0.052 0.003 Locus 119 : 6 alleles 0.9% missing data 140 (0.246) 0.246 0.297 144 (0.365) 0.368 0.475 152 (0.129) 0.128 0.082 156 (0.038) 0.037 0.002 148 (0.163) 0.162 0.141 160 (0.059) 0.060 0.003 Locus 120 : 6 alleles 6.5% missing data 192 (0.341) 0.344 0.285 188 (0.249) 0.247 0.458 196 (0.165) 0.164 0.178 184 (0.174) 0.179 0.017 200 (0.055) 0.051 0.062 180 (0.017) 0.015 0.001 Locus 121 : 6 alleles 0.0% missing data 155 (0.454) 0.456 0.652 159 (0.075) 0.070 0.191 151 (0.346) 0.351 0.151 143 (0.044) 0.044 0.003 147 (0.058) 0.058 0.003 163 (0.023) 0.022 0.001 Locus 122 : 6 alleles 4.6% missing data 233 (0.106) 0.102 0.291 241 (0.455) 0.459 0.470 237 (0.372) 0.377 0.236 245 (0.018) 0.016 0.001 229 (0.018) 0.016 0.001 249 (0.032) 0.031 0.002 Values of parameters used in structure: DATAFILE=/Users/wswanson/Desktop/america/project_data, OUTFILE=/Users/wswanson/Desktop/america/test/Results/test_run_2, NUMINDS=108, NUMLOCI=122, MISSING=-9, LABEL=1, POPDATA=0, POPFLAG=0, PHENOTYPE=0, EXTRACOLS=0, MAXPOPS=2, BURNIN=5000, NUMREPS=100000, USEPOPINFO=0, INFERALPHA=1, INFERLAMBDA=0, POPSPECIFICLAMBDA=0, POPALPHAS=0, COMPUTEPROB=1, NOADMIX=0, ADMBURNIN=2500, UPDATEFREQ=1, PRINTLIKES=0, INTERMEDSAVE=0, PRINTNET=0, PRINTLAMBDA=0, ANCESTDIST=0, NUMBOXES=1000, ANCESTPINT=0.90000, GENSBACK=2, MIGRPRIOR=0.05000, PRINTQHAT=0, PRINTQSUM=0, ALPHA=1.0000, FREQSCORR=1, FPRIORMEAN=0.0100, FPRIORSD=0.0500, ONEFST=0, LAMBDA=1.0000, UNIFPRIORALPHA=1, ALPHAMAX=10.0000, ALPHAPRIORA=1.0000, ALPHAPRIORB=2.0000, ALPHAPROPSD=0.0250, STARTATPOPINFO=0, RANDOMIZE=1, LINKAGE=0, METROFREQ=10, REPORTHITRATE=0, MARKOVPHASE=-1, PHASED=0, PLOIDY=2, PHASEINFO=0 [STRAT parameters]: NUMSIMSTATS=1000, PHENOTYPECOL=-9, POOLFREQ=10, LOCUSxONLY=0, EMERROR=0.00100, MISSINGPHENO=-9,