---------------------------------------------------- STRUCTURE by Pritchard, Stephens and Donnelly (2000) and Falush, Stephens and Pritchard (2003) Code by Pritchard and Falush Version 2.2 (March 2007) ---------------------------------------------------- Command line arguments: bin/structure -m "/Users/wswanson/Desktop/america/test/mainparams" -e "/Users/wswanson/Desktop/america/test/extraparams" Input File: /Users/wswanson/Desktop/america/project_data Run parameters: 108 individuals 122 loci 1 populations assumed 5000 Burn-in period 100000 Reps -------------------------------------------- Overall proportion of membership of the sample in each of the 1 clusters Inferred Clusters 1 1.000 -------------------------------------------- Allele-freq. divergence among pops (Net nucleotide distance), computed using point estimates of P. 1 1 - Average distances (expected heterozygosity) between individuals in same cluster: cluster 1 : -1.7428 -------------------------------------------- Estimated Ln Prob of Data = -30764.5 Mean value of ln likelihood = -30597.9 Variance of ln likelihood = 333.2 Mean value of Fst_1 = 0.0016 Inferred ancestry of individuals: Label (%Miss) : Inferred clusters 1 995 (7) : 1.000 2 996 (0) : 1.000 3 997 (0) : 1.000 4 998 (3) : 1.000 5 999 (3) : 1.000 6 1000 (1) : 1.000 7 1001 (1) : 1.000 8 1003 (0) : 1.000 9 1004 (7) : 1.000 10 1005 (2) : 1.000 11 1006 (0) : 1.000 12 1007 (2) : 1.000 13 1008 (6) : 1.000 14 1009 (4) : 1.000 15 1010 (0) : 1.000 16 1011 (0) : 1.000 17 1012 (1) : 1.000 18 1013 (1) : 1.000 19 1014 (5) : 1.000 20 1015 (4) : 1.000 21 1016 (6) : 1.000 22 1017 (0) : 1.000 23 1018 (2) : 1.000 24 1019 (8) : 1.000 25 830 (4) : 1.000 26 832 (0) : 1.000 27 833 (9) : 1.000 28 834 (9) : 1.000 29 835 (1) : 1.000 30 837 (1) : 1.000 31 838 (9) : 1.000 32 839 (9) : 1.000 33 840 (11) : 1.000 34 841 (11) : 1.000 35 842 (12) : 1.000 36 843 (0) : 1.000 37 844 (3) : 1.000 38 845 (4) : 1.000 39 846 (4) : 1.000 40 847 (3) : 1.000 41 848 (4) : 1.000 42 849 (4) : 1.000 43 850 (4) : 1.000 44 851 (3) : 1.000 45 852 (1) : 1.000 46 702 (6) : 1.000 47 703 (0) : 1.000 48 704 (2) : 1.000 49 705 (2) : 1.000 50 706 (3) : 1.000 51 707 (5) : 1.000 52 708 (1) : 1.000 53 709 (2) : 1.000 54 710 (4) : 1.000 55 792 (2) : 1.000 56 793 (5) : 1.000 57 827 (2) : 1.000 58 970 (2) : 1.000 59 854 (9) : 1.000 60 855 (2) : 1.000 61 856 (3) : 1.000 62 857 (5) : 1.000 63 858 (0) : 1.000 64 859 (1) : 1.000 65 860 (2) : 1.000 66 861 (4) : 1.000 67 862 (2) : 1.000 68 863 (2) : 1.000 69 864 (2) : 1.000 70 865 (5) : 1.000 71 866 (0) : 1.000 72 867 (8) : 1.000 73 868 (0) : 1.000 74 869 (3) : 1.000 75 870 (2) : 1.000 76 871 (0) : 1.000 77 872 (1) : 1.000 78 873 (3) : 1.000 79 874 (5) : 1.000 80 875 (11) : 1.000 81 876 (0) : 1.000 82 877 (7) : 1.000 83 878 (4) : 1.000 84 1037 (5) : 1.000 85 1038 (3) : 1.000 86 1039 (6) : 1.000 87 1040 (4) : 1.000 88 1041 (4) : 1.000 89 1042 (5) : 1.000 90 1043 (3) : 1.000 91 1044 (5) : 1.000 92 1045 (1) : 1.000 93 1046 (2) : 1.000 94 1047 (0) : 1.000 95 1048 (5) : 1.000 96 1049 (0) : 1.000 97 1050 (0) : 1.000 98 1051 (0) : 1.000 99 1052 (1) : 1.000 100 1053 (1) : 1.000 101 1054 (1) : 1.000 102 1055 (4) : 1.000 103 1056 (2) : 1.000 104 1057 (2) : 1.000 105 1058 (1) : 1.000 106 1059 (0) : 1.000 107 1060 (0) : 1.000 108 1061 (0) : 1.000 Estimated Allele Frequencies in each cluster First column gives estimated ancestral frequencies Locus 1 : 4 alleles 3.7% missing data 120 (0.311) 0.312 128 (0.068) 0.066 126 (0.596) 0.598 122 (0.025) 0.024 Locus 2 : 8 alleles 1.9% missing data 128 (0.540) 0.546 124 (0.316) 0.319 126 (0.051) 0.050 122 (0.019) 0.018 130 (0.033) 0.032 114 (0.019) 0.018 116 (0.010) 0.009 120 (0.010) 0.009 Locus 3 : 10 alleles 7.4% missing data 124 (0.615) 0.623 146 (0.133) 0.134 144 (0.091) 0.091 148 (0.030) 0.029 142 (0.058) 0.058 136 (0.011) 0.009 140 (0.016) 0.014 128 (0.011) 0.010 152 (0.020) 0.019 150 (0.016) 0.014 Locus 4 : 9 alleles 0.9% missing data 129 (0.656) 0.664 137 (0.046) 0.045 135 (0.152) 0.152 133 (0.041) 0.040 131 (0.055) 0.054 139 (0.015) 0.013 127 (0.015) 0.013 125 (0.010) 0.009 141 (0.010) 0.009 Locus 5 : 7 alleles 3.7% missing data 156 (0.290) 0.292 142 (0.647) 0.652 152 (0.011) 0.009 164 (0.011) 0.009 144 (0.011) 0.009 154 (0.015) 0.014 158 (0.015) 0.014 Locus 6 : 6 alleles 3.7% missing data 234 (0.410) 0.412 228 (0.325) 0.327 232 (0.085) 0.084 230 (0.090) 0.089 226 (0.080) 0.079 240 (0.011) 0.009 Locus 7 : 10 alleles 0.0% missing data 148 (0.010) 0.009 142 (0.133) 0.133 144 (0.019) 0.018 134 (0.023) 0.022 146 (0.206) 0.208 140 (0.302) 0.305 150 (0.176) 0.177 138 (0.094) 0.093 152 (0.023) 0.022 136 (0.015) 0.013 Locus 8 : 9 alleles 1.9% missing data 124 (0.269) 0.271 118 (0.028) 0.027 112 (0.479) 0.484 116 (0.131) 0.131 122 (0.028) 0.027 120 (0.024) 0.023 114 (0.011) 0.009 128 (0.010) 0.009 126 (0.019) 0.018 Locus 9 : 5 alleles 4.6% missing data 182 (0.472) 0.474 186 (0.383) 0.384 180 (0.077) 0.076 188 (0.044) 0.043 190 (0.025) 0.023 Locus 10 : 4 alleles 2.8% missing data 98 (0.730) 0.733 96 (0.220) 0.220 100 (0.034) 0.033 108 (0.016) 0.014 Locus 11 : 7 alleles 0.0% missing data 134 (0.059) 0.058 130 (0.716) 0.722 140 (0.059) 0.058 142 (0.090) 0.090 136 (0.033) 0.032 132 (0.033) 0.031 144 (0.010) 0.009 Locus 12 : 4 alleles 2.8% missing data 120 (0.777) 0.780 114 (0.182) 0.182 118 (0.025) 0.024 122 (0.016) 0.014 Locus 13 : 5 alleles 0.0% missing data 148 (0.895) 0.901 146 (0.060) 0.059 150 (0.024) 0.023 156 (0.010) 0.009 168 (0.011) 0.009 Locus 14 : 5 alleles 0.9% missing data 217 (0.607) 0.611 227 (0.242) 0.243 223 (0.088) 0.087 225 (0.043) 0.041 219 (0.020) 0.018 Locus 15 : 7 alleles 0.9% missing data 258 (0.673) 0.679 260 (0.086) 0.086 250 (0.060) 0.059 262 (0.060) 0.059 264 (0.082) 0.081 256 (0.010) 0.009 254 (0.029) 0.027 Locus 16 : 5 alleles 1.9% missing data 241 (0.097) 0.096 235 (0.148) 0.147 233 (0.285) 0.286 229 (0.268) 0.268 231 (0.202) 0.202 Locus 17 : 10 alleles 0.0% missing data 171 (0.041) 0.040 165 (0.250) 0.252 163 (0.115) 0.115 173 (0.314) 0.318 169 (0.041) 0.040 147 (0.063) 0.062 161 (0.015) 0.013 175 (0.080) 0.080 177 (0.071) 0.071 179 (0.010) 0.009 Locus 18 : 6 alleles 3.7% missing data 175 (0.029) 0.028 165 (0.775) 0.781 171 (0.034) 0.033 167 (0.076) 0.075 163 (0.057) 0.056 169 (0.029) 0.028 Locus 19 : 6 alleles 4.6% missing data 218 (0.851) 0.858 220 (0.062) 0.061 214 (0.039) 0.038 224 (0.016) 0.014 216 (0.020) 0.019 222 (0.011) 0.009 Locus 20 : 6 alleles 15.7% missing data 198 (0.275) 0.277 194 (0.450) 0.453 196 (0.160) 0.159 190 (0.028) 0.026 188 (0.075) 0.075 186 (0.012) 0.011 Locus 21 : 8 alleles 5.6% missing data 183 (0.099) 0.099 175 (0.229) 0.231 189 (0.035) 0.033 187 (0.403) 0.406 191 (0.099) 0.099 193 (0.095) 0.094 177 (0.025) 0.023 185 (0.015) 0.014 Locus 22 : 7 alleles 7.4% missing data 143 (0.512) 0.516 145 (0.121) 0.121 141 (0.035) 0.034 149 (0.192) 0.193 147 (0.117) 0.116 151 (0.011) 0.010 133 (0.011) 0.010 Locus 23 : 10 alleles 0.9% missing data 251 (0.068) 0.067 249 (0.287) 0.290 247 (0.222) 0.224 241 (0.032) 0.031 245 (0.089) 0.089 243 (0.251) 0.254 255 (0.015) 0.013 253 (0.010) 0.009 233 (0.010) 0.009 237 (0.015) 0.013 Locus 24 : 9 alleles 5.6% missing data 134 (0.395) 0.399 132 (0.362) 0.366 136 (0.053) 0.052 144 (0.025) 0.024 128 (0.066) 0.066 130 (0.015) 0.014 140 (0.062) 0.061 146 (0.011) 0.009 142 (0.011) 0.009 Locus 25 : 9 alleles 1.9% missing data 230 (0.300) 0.303 228 (0.265) 0.267 226 (0.073) 0.073 204 (0.211) 0.212 224 (0.073) 0.072 222 (0.024) 0.023 218 (0.015) 0.014 232 (0.029) 0.027 234 (0.011) 0.009 Locus 26 : 9 alleles 12.0% missing data 200 (0.266) 0.267 184 (0.501) 0.507 202 (0.021) 0.020 186 (0.096) 0.095 196 (0.012) 0.010 206 (0.056) 0.055 208 (0.027) 0.025 188 (0.011) 0.010 198 (0.011) 0.010 Locus 27 : 10 alleles 0.0% missing data 188 (0.546) 0.553 200 (0.075) 0.075 190 (0.163) 0.164 186 (0.027) 0.026 192 (0.041) 0.040 204 (0.041) 0.040 210 (0.015) 0.013 194 (0.010) 0.009 206 (0.041) 0.040 208 (0.041) 0.040 Locus 28 : 9 alleles 1.9% missing data 146 (0.314) 0.317 144 (0.194) 0.195 134 (0.220) 0.222 138 (0.171) 0.172 136 (0.020) 0.018 148 (0.028) 0.027 150 (0.010) 0.009 142 (0.033) 0.032 140 (0.010) 0.009 Locus 29 : 6 alleles 1.9% missing data 141 (0.265) 0.266 119 (0.524) 0.527 139 (0.175) 0.175 121 (0.011) 0.009 137 (0.015) 0.014 147 (0.011) 0.009 Locus 30 : 9 alleles 9.3% missing data 207 (0.410) 0.414 199 (0.295) 0.298 193 (0.016) 0.015 205 (0.116) 0.117 201 (0.045) 0.044 209 (0.040) 0.039 203 (0.050) 0.049 211 (0.016) 0.015 195 (0.011) 0.010 Locus 31 : 3 alleles 3.7% missing data 183 (0.822) 0.824 174 (0.162) 0.161 189 (0.016) 0.014 Locus 32 : 8 alleles 0.9% missing data 182 (0.170) 0.171 172 (0.202) 0.203 176 (0.327) 0.329 180 (0.140) 0.140 174 (0.050) 0.050 178 (0.073) 0.072 184 (0.019) 0.018 186 (0.019) 0.018 Locus 33 : 5 alleles 0.9% missing data 158 (0.586) 0.589 154 (0.260) 0.260 162 (0.096) 0.096 148 (0.047) 0.046 156 (0.011) 0.009 Locus 34 : 10 alleles 5.6% missing data 173 (0.301) 0.304 163 (0.103) 0.103 169 (0.140) 0.140 171 (0.167) 0.168 177 (0.015) 0.014 175 (0.084) 0.084 159 (0.011) 0.009 165 (0.140) 0.140 167 (0.015) 0.014 161 (0.025) 0.023 Locus 35 : 11 alleles 0.9% missing data 104 (0.115) 0.115 102 (0.330) 0.334 106 (0.067) 0.067 98 (0.089) 0.089 100 (0.133) 0.134 110 (0.062) 0.062 108 (0.028) 0.027 112 (0.024) 0.022 94 (0.115) 0.115 96 (0.023) 0.022 92 (0.015) 0.013 Locus 36 : 5 alleles 0.0% missing data 166 (0.545) 0.548 172 (0.405) 0.407 174 (0.015) 0.013 176 (0.015) 0.013 168 (0.020) 0.018 Locus 37 : 6 alleles 24.1% missing data 120 (0.509) 0.512 132 (0.107) 0.106 130 (0.176) 0.176 128 (0.089) 0.088 118 (0.019) 0.018 126 (0.100) 0.100 Locus 38 : 9 alleles 1.9% missing data 149 (0.042) 0.041 147 (0.238) 0.240 173 (0.136) 0.136 145 (0.483) 0.489 171 (0.019) 0.018 143 (0.050) 0.049 175 (0.010) 0.009 167 (0.010) 0.009 169 (0.010) 0.009 Locus 39 : 7 alleles 0.0% missing data 170 (0.272) 0.274 166 (0.250) 0.251 172 (0.192) 0.193 168 (0.228) 0.229 164 (0.037) 0.036 176 (0.010) 0.009 162 (0.010) 0.009 Locus 40 : 4 alleles 6.5% missing data 180 (0.420) 0.422 174 (0.349) 0.349 182 (0.206) 0.205 176 (0.026) 0.024 Locus 41 : 2 alleles 4.6% missing data 208 (0.601) 0.602 212 (0.399) 0.398 Locus 42 : 4 alleles 0.0% missing data 188 (0.337) 0.337 182 (0.209) 0.209 191 (0.124) 0.123 185 (0.331) 0.331 Locus 43 : 6 alleles 6.5% missing data 249 (0.415) 0.418 246 (0.212) 0.212 255 (0.111) 0.111 252 (0.044) 0.043 261 (0.087) 0.086 258 (0.131) 0.130 Locus 44 : 4 alleles 0.9% missing data 115 (0.963) 0.968 124 (0.016) 0.014 121 (0.010) 0.009 118 (0.011) 0.009 Locus 45 : 7 alleles 0.9% missing data 141 (0.547) 0.552 153 (0.118) 0.118 150 (0.230) 0.231 156 (0.051) 0.050 159 (0.024) 0.022 147 (0.019) 0.018 144 (0.010) 0.009 Locus 46 : 5 alleles 12.0% missing data 120 (0.343) 0.344 108 (0.407) 0.409 105 (0.169) 0.169 126 (0.042) 0.041 129 (0.038) 0.036 Locus 47 : 6 alleles 5.6% missing data 234 (0.459) 0.462 225 (0.266) 0.266 228 (0.039) 0.038 231 (0.129) 0.129 240 (0.053) 0.052 237 (0.054) 0.052 Locus 48 : 6 alleles 4.6% missing data 242 (0.427) 0.430 239 (0.328) 0.330 245 (0.160) 0.160 236 (0.015) 0.014 224 (0.053) 0.052 230 (0.016) 0.014 Locus 49 : 8 alleles 6.5% missing data 271 (0.604) 0.610 274 (0.209) 0.210 268 (0.011) 0.009 277 (0.090) 0.090 262 (0.025) 0.024 283 (0.016) 0.014 265 (0.034) 0.033 280 (0.011) 0.009 Locus 50 : 8 alleles 15.7% missing data 195 (0.479) 0.484 210 (0.147) 0.148 207 (0.105) 0.105 198 (0.027) 0.026 213 (0.059) 0.058 201 (0.090) 0.090 216 (0.080) 0.079 204 (0.012) 0.011 Locus 51 : 6 alleles 6.5% missing data 221 (0.696) 0.702 239 (0.231) 0.231 236 (0.035) 0.034 224 (0.016) 0.014 230 (0.011) 0.010 242 (0.011) 0.010 Locus 52 : 4 alleles 1.9% missing data 111 (0.246) 0.246 96 (0.728) 0.731 102 (0.015) 0.014 120 (0.011) 0.009 Locus 53 : 6 alleles 0.9% missing data 117 (0.623) 0.627 126 (0.181) 0.181 129 (0.119) 0.119 132 (0.047) 0.045 138 (0.020) 0.018 123 (0.010) 0.009 Locus 54 : 6 alleles 2.8% missing data 236 (0.441) 0.444 233 (0.282) 0.283 239 (0.034) 0.033 230 (0.217) 0.218 218 (0.015) 0.014 227 (0.011) 0.009 Locus 55 : 5 alleles 0.9% missing data 208 (0.197) 0.197 199 (0.147) 0.147 205 (0.155) 0.155 196 (0.481) 0.484 202 (0.020) 0.018 Locus 56 : 8 alleles 4.6% missing data 294 (0.514) 0.519 288 (0.066) 0.065 291 (0.135) 0.135 306 (0.122) 0.122 309 (0.048) 0.047 303 (0.011) 0.009 297 (0.094) 0.093 300 (0.011) 0.009 Locus 57 : 6 alleles 12.0% missing data 193 (0.032) 0.030 190 (0.446) 0.448 187 (0.396) 0.398 184 (0.103) 0.102 181 (0.012) 0.010 196 (0.012) 0.010 Locus 58 : 4 alleles 11.1% missing data 116 (0.432) 0.433 113 (0.473) 0.475 104 (0.063) 0.062 107 (0.032) 0.031 Locus 59 : 6 alleles 0.0% missing data 95 (0.827) 0.834 101 (0.024) 0.022 98 (0.077) 0.076 89 (0.020) 0.018 86 (0.033) 0.032 107 (0.019) 0.018 Locus 60 : 7 alleles 1.9% missing data 238 (0.300) 0.302 256 (0.232) 0.233 241 (0.380) 0.383 253 (0.038) 0.036 259 (0.024) 0.023 244 (0.015) 0.014 235 (0.011) 0.009 Locus 61 : 5 alleles 0.9% missing data 192 (0.817) 0.822 195 (0.097) 0.096 198 (0.029) 0.027 189 (0.043) 0.041 186 (0.015) 0.014 Locus 62 : 7 alleles 1.9% missing data 127 (0.602) 0.607 121 (0.146) 0.146 130 (0.051) 0.050 124 (0.047) 0.046 133 (0.087) 0.087 118 (0.029) 0.027 136 (0.038) 0.036 Locus 63 : 7 alleles 4.6% missing data 144 (0.266) 0.268 141 (0.169) 0.169 132 (0.402) 0.405 138 (0.131) 0.131 147 (0.011) 0.009 135 (0.011) 0.009 126 (0.011) 0.009 Locus 64 : 5 alleles 3.7% missing data 113 (0.556) 0.559 116 (0.145) 0.145 122 (0.104) 0.103 119 (0.184) 0.183 131 (0.011) 0.009 Locus 65 : 5 alleles 1.9% missing data 163 (0.556) 0.558 169 (0.025) 0.023 157 (0.129) 0.129 160 (0.143) 0.143 166 (0.147) 0.147 Locus 66 : 8 alleles 4.6% missing data 156 (0.412) 0.416 150 (0.347) 0.350 144 (0.038) 0.037 159 (0.053) 0.052 162 (0.015) 0.014 141 (0.052) 0.051 153 (0.044) 0.043 147 (0.038) 0.037 Locus 67 : 7 alleles 11.1% missing data 263 (0.206) 0.206 257 (0.081) 0.080 251 (0.360) 0.362 260 (0.046) 0.045 239 (0.076) 0.075 266 (0.191) 0.191 254 (0.041) 0.040 Locus 68 : 5 alleles 1.9% missing data 237 (0.266) 0.267 234 (0.235) 0.235 249 (0.075) 0.074 246 (0.413) 0.415 240 (0.011) 0.009 Locus 69 : 5 alleles 3.7% missing data 91 (0.789) 0.794 79 (0.058) 0.057 88 (0.058) 0.057 94 (0.080) 0.079 76 (0.016) 0.014 Locus 70 : 7 alleles 0.9% missing data 132 (0.365) 0.367 126 (0.372) 0.375 135 (0.091) 0.091 129 (0.069) 0.068 123 (0.059) 0.059 141 (0.015) 0.014 120 (0.029) 0.027 Locus 71 : 5 alleles 0.9% missing data 266 (0.183) 0.183 257 (0.324) 0.325 260 (0.354) 0.356 263 (0.128) 0.127 254 (0.011) 0.009 Locus 72 : 5 alleles 0.9% missing data 110 (0.282) 0.283 107 (0.554) 0.557 113 (0.079) 0.078 101 (0.065) 0.064 116 (0.020) 0.018 Locus 73 : 6 alleles 3.7% missing data 155 (0.766) 0.771 158 (0.135) 0.135 161 (0.043) 0.042 152 (0.020) 0.019 164 (0.025) 0.024 146 (0.011) 0.009 Locus 74 : 5 alleles 0.0% missing data 157 (0.810) 0.815 151 (0.137) 0.136 154 (0.028) 0.027 160 (0.015) 0.014 166 (0.010) 0.009 Locus 75 : 6 alleles 5.6% missing data 121 (0.025) 0.024 109 (0.167) 0.167 118 (0.040) 0.038 115 (0.290) 0.291 112 (0.251) 0.252 106 (0.228) 0.228 Locus 76 : 4 alleles 7.4% missing data 165 (0.615) 0.617 156 (0.167) 0.166 162 (0.192) 0.192 168 (0.026) 0.025 Locus 77 : 7 alleles 0.9% missing data 228 (0.517) 0.521 240 (0.261) 0.262 249 (0.042) 0.041 252 (0.020) 0.018 234 (0.131) 0.131 225 (0.015) 0.014 243 (0.015) 0.014 Locus 78 : 5 alleles 0.9% missing data 155 (0.405) 0.406 152 (0.513) 0.516 158 (0.043) 0.041 149 (0.024) 0.023 140 (0.015) 0.014 Locus 79 : 6 alleles 8.3% missing data 205 (0.065) 0.064 190 (0.788) 0.794 202 (0.079) 0.078 199 (0.016) 0.015 196 (0.011) 0.010 187 (0.041) 0.039 Locus 80 : 5 alleles 0.0% missing data 133 (0.433) 0.435 136 (0.033) 0.032 130 (0.486) 0.488 127 (0.037) 0.036 121 (0.010) 0.009 Locus 81 : 5 alleles 14.8% missing data 196 (0.028) 0.026 193 (0.521) 0.523 187 (0.244) 0.244 190 (0.128) 0.127 178 (0.080) 0.079 Locus 82 : 6 alleles 0.9% missing data 107 (0.065) 0.064 104 (0.713) 0.718 98 (0.154) 0.154 110 (0.029) 0.027 113 (0.024) 0.023 101 (0.015) 0.014 Locus 83 : 8 alleles 3.7% missing data 143 (0.161) 0.162 140 (0.070) 0.070 146 (0.184) 0.185 137 (0.326) 0.328 134 (0.148) 0.148 131 (0.089) 0.089 128 (0.011) 0.009 125 (0.011) 0.009 Locus 84 : 5 alleles 1.9% missing data 136 (0.326) 0.327 133 (0.523) 0.526 130 (0.112) 0.111 139 (0.024) 0.023 127 (0.015) 0.014 Locus 85 : 6 alleles 7.4% missing data 205 (0.665) 0.670 202 (0.286) 0.287 208 (0.011) 0.009 214 (0.016) 0.015 193 (0.011) 0.009 190 (0.011) 0.010 Locus 86 : 8 alleles 2.8% missing data 243 (0.387) 0.390 228 (0.097) 0.096 246 (0.423) 0.427 252 (0.020) 0.018 237 (0.033) 0.032 240 (0.020) 0.018 255 (0.010) 0.009 249 (0.011) 0.009 Locus 87 : 5 alleles 5.6% missing data 244 (0.695) 0.699 241 (0.191) 0.191 247 (0.059) 0.057 227 (0.040) 0.038 238 (0.016) 0.014 Locus 88 : 6 alleles 1.9% missing data 142 (0.261) 0.262 139 (0.311) 0.312 151 (0.119) 0.119 145 (0.024) 0.023 148 (0.274) 0.275 154 (0.010) 0.009 Locus 89 : 6 alleles 0.0% missing data 179 (0.599) 0.603 188 (0.055) 0.054 176 (0.011) 0.009 182 (0.185) 0.185 184 (0.127) 0.126 185 (0.024) 0.023 Locus 90 : 8 alleles 4.6% missing data 166 (0.186) 0.187 163 (0.029) 0.028 160 (0.513) 0.518 154 (0.094) 0.094 172 (0.080) 0.079 169 (0.052) 0.051 175 (0.011) 0.009 148 (0.034) 0.033 Locus 91 : 8 alleles 7.4% missing data 194 (0.391) 0.395 179 (0.329) 0.332 200 (0.111) 0.110 197 (0.110) 0.110 206 (0.016) 0.014 191 (0.011) 0.010 203 (0.021) 0.019 185 (0.011) 0.010 Locus 92 : 4 alleles 0.0% missing data 156 (0.210) 0.209 150 (0.674) 0.677 153 (0.101) 0.100 159 (0.015) 0.014 Locus 93 : 6 alleles 3.7% missing data 184 (0.764) 0.770 190 (0.164) 0.164 181 (0.025) 0.024 187 (0.020) 0.019 196 (0.016) 0.014 193 (0.011) 0.009 Locus 94 : 8 alleles 1.9% missing data 247 (0.513) 0.518 238 (0.141) 0.141 241 (0.136) 0.136 235 (0.119) 0.118 244 (0.033) 0.032 229 (0.015) 0.014 250 (0.015) 0.013 253 (0.028) 0.027 Locus 95 : 6 alleles 0.9% missing data 135 (0.420) 0.422 126 (0.367) 0.369 141 (0.033) 0.032 132 (0.132) 0.132 129 (0.024) 0.023 138 (0.024) 0.023 Locus 96 : 8 alleles 6.5% missing data 172 (0.284) 0.286 193 (0.227) 0.228 190 (0.124) 0.124 196 (0.181) 0.182 187 (0.039) 0.038 199 (0.044) 0.043 181 (0.091) 0.090 184 (0.011) 0.009 Locus 97 : 4 alleles 2.8% missing data 252 (0.057) 0.056 246 (0.684) 0.687 249 (0.243) 0.243 261 (0.016) 0.014 Locus 98 : 3 alleles 0.0% missing data 200 (0.660) 0.662 197 (0.320) 0.320 194 (0.020) 0.018 Locus 99 : 4 alleles 2.8% missing data 119 (0.829) 0.832 122 (0.076) 0.075 113 (0.075) 0.074 128 (0.020) 0.019 Locus 100 : 5 alleles 0.9% missing data 156 (0.486) 0.488 148 (0.056) 0.054 140 (0.151) 0.151 152 (0.278) 0.279 160 (0.029) 0.028 Locus 101 : 3 alleles 10.2% missing data 254 (0.371) 0.371 246 (0.562) 0.563 250 (0.067) 0.066 Locus 102 : 4 alleles 0.9% missing data 201 (0.521) 0.523 197 (0.375) 0.376 193 (0.033) 0.032 205 (0.070) 0.069 Locus 103 : 8 alleles 3.7% missing data 202 (0.481) 0.486 198 (0.253) 0.255 186 (0.029) 0.028 210 (0.011) 0.009 206 (0.052) 0.051 166 (0.060) 0.060 194 (0.084) 0.084 190 (0.029) 0.028 Locus 104 : 6 alleles 0.9% missing data 162 (0.191) 0.191 158 (0.411) 0.413 166 (0.308) 0.309 178 (0.034) 0.032 174 (0.011) 0.009 182 (0.046) 0.045 Locus 105 : 5 alleles 0.9% missing data 166 (0.075) 0.074 162 (0.567) 0.570 170 (0.287) 0.287 174 (0.061) 0.059 178 (0.011) 0.009 Locus 106 : 7 alleles 4.6% missing data 259 (0.187) 0.187 251 (0.327) 0.329 267 (0.034) 0.033 263 (0.085) 0.084 255 (0.201) 0.202 247 (0.155) 0.155 235 (0.011) 0.009 Locus 107 : 7 alleles 1.9% missing data 185 (0.363) 0.365 181 (0.454) 0.457 189 (0.128) 0.127 177 (0.011) 0.009 193 (0.015) 0.014 201 (0.011) 0.009 197 (0.020) 0.018 Locus 108 : 6 alleles 1.9% missing data 127 (0.383) 0.385 119 (0.193) 0.193 123 (0.160) 0.160 131 (0.160) 0.160 135 (0.088) 0.087 139 (0.015) 0.014 Locus 109 : 10 alleles 7.4% missing data 342 (0.142) 0.143 322 (0.114) 0.114 330 (0.104) 0.105 338 (0.217) 0.219 358 (0.016) 0.014 326 (0.134) 0.134 334 (0.170) 0.171 350 (0.039) 0.038 318 (0.020) 0.019 346 (0.044) 0.043 Locus 110 : 4 alleles 5.6% missing data 180 (0.117) 0.116 168 (0.178) 0.178 176 (0.584) 0.586 172 (0.121) 0.120 Locus 111 : 10 alleles 3.7% missing data 196 (0.200) 0.202 190 (0.309) 0.313 188 (0.146) 0.147 192 (0.128) 0.128 200 (0.046) 0.046 194 (0.123) 0.124 198 (0.015) 0.014 204 (0.011) 0.009 184 (0.010) 0.009 186 (0.011) 0.009 Locus 112 : 6 alleles 3.7% missing data 207 (0.237) 0.238 203 (0.436) 0.439 199 (0.108) 0.108 211 (0.020) 0.019 195 (0.141) 0.140 191 (0.057) 0.056 Locus 113 : 10 alleles 1.9% missing data 182 (0.094) 0.094 180 (0.334) 0.338 184 (0.073) 0.072 178 (0.316) 0.320 174 (0.090) 0.090 172 (0.019) 0.018 168 (0.028) 0.027 194 (0.019) 0.018 176 (0.015) 0.013 158 (0.010) 0.009 Locus 114 : 5 alleles 0.9% missing data 164 (0.282) 0.283 152 (0.206) 0.206 156 (0.278) 0.279 168 (0.074) 0.073 160 (0.160) 0.160 Locus 115 : 5 alleles 0.0% missing data 198 (0.122) 0.122 190 (0.486) 0.489 206 (0.101) 0.100 202 (0.271) 0.272 210 (0.020) 0.018 Locus 116 : 5 alleles 0.9% missing data 135 (0.137) 0.137 143 (0.420) 0.421 147 (0.223) 0.223 139 (0.187) 0.187 151 (0.033) 0.032 Locus 117 : 5 alleles 2.8% missing data 232 (0.167) 0.167 244 (0.458) 0.460 240 (0.228) 0.228 248 (0.122) 0.121 236 (0.025) 0.023 Locus 118 : 5 alleles 0.9% missing data 198 (0.237) 0.238 194 (0.486) 0.489 206 (0.047) 0.045 202 (0.197) 0.197 190 (0.033) 0.032 Locus 119 : 6 alleles 0.9% missing data 140 (0.267) 0.268 144 (0.416) 0.418 152 (0.105) 0.105 156 (0.024) 0.023 148 (0.150) 0.150 160 (0.038) 0.036 Locus 120 : 6 alleles 6.5% missing data 192 (0.316) 0.317 188 (0.340) 0.341 196 (0.167) 0.168 184 (0.111) 0.111 200 (0.054) 0.053 180 (0.011) 0.010 Locus 121 : 6 alleles 0.0% missing data 155 (0.537) 0.541 159 (0.122) 0.122 151 (0.260) 0.261 143 (0.028) 0.027 147 (0.037) 0.036 163 (0.015) 0.014 Locus 122 : 6 alleles 4.6% missing data 233 (0.189) 0.189 241 (0.459) 0.462 237 (0.310) 0.311 245 (0.011) 0.009 229 (0.011) 0.009 249 (0.020) 0.019 Values of parameters used in structure: DATAFILE=/Users/wswanson/Desktop/america/project_data, OUTFILE=/Users/wswanson/Desktop/america/test/Results/test_run_1, NUMINDS=108, NUMLOCI=122, MISSING=-9, LABEL=1, POPDATA=0, POPFLAG=0, PHENOTYPE=0, EXTRACOLS=0, MAXPOPS=1, BURNIN=5000, NUMREPS=100000, USEPOPINFO=0, INFERALPHA=1, INFERLAMBDA=0, POPSPECIFICLAMBDA=0, POPALPHAS=0, COMPUTEPROB=1, NOADMIX=0, ADMBURNIN=2500, UPDATEFREQ=1, PRINTLIKES=0, INTERMEDSAVE=0, PRINTNET=0, PRINTLAMBDA=0, ANCESTDIST=0, NUMBOXES=1000, ANCESTPINT=0.90000, GENSBACK=2, MIGRPRIOR=0.05000, PRINTQHAT=0, PRINTQSUM=0, ALPHA=1.0000, FREQSCORR=1, FPRIORMEAN=0.0100, FPRIORSD=0.0500, ONEFST=0, LAMBDA=1.0000, UNIFPRIORALPHA=1, ALPHAMAX=10.0000, ALPHAPRIORA=1.0000, ALPHAPRIORB=2.0000, ALPHAPROPSD=0.0250, STARTATPOPINFO=0, RANDOMIZE=1, LINKAGE=0, METROFREQ=10, REPORTHITRATE=0, MARKOVPHASE=-1, PHASED=0, PLOIDY=2, PHASEINFO=0 [STRAT parameters]: NUMSIMSTATS=1000, PHENOTYPECOL=-9, POOLFREQ=10, LOCUSxONLY=0, EMERROR=0.00100, MISSINGPHENO=-9,