intraspecies_cyl.h

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#pragma once
 
// Wm includes
#include "apps/wmapplication.h"
#include "app_setup_helper.h"
 
// STL includes
#include <memory>
 
namespace wxm
{
namespace apps
{
namespace five_moment
{
class IntraspeciesCyl : public WmApplication
{
public:
    IntraspeciesCyl();
 
    ~IntraspeciesCyl() override;
 
    void setup(const WxCryptSet& wxc) override;
 
    const std::vector<int>& getInputVariableIndexes(int flag) const override
    {
        return _input_variables;
    }
    const std::vector<int>& getAuxiliaryVariableIndexes(int flag) const override
    {
        return _aux_variables;
    }
    const std::vector<int>& getOutputVariableIndexes(int flag) const override
    {
        return _input_variables;
    }
 
    real source(const real* q,
                const real* aux,
                const elementGeometry_t* pEG,
                real* source) const override;
 
protected:
    std::unique_ptr<AppSetupHelper> _setup_helper;
    
    real _min_density;  
    real _min_pressure; 
    real _gas_gamma;    
    real _charge;
    real _mass;
    real _nuptau;
    real _coulomb_log;
    real _collision_coefficient;
    real _diffusivity_min;
    real _diffusivity_max;
    real _minimum_frequency;
    bool _ifconst_mu;
    real _const_mu;
    bool _ifconst_k;
    real _const_k;
 
    bool _is_neutral;
    int _radial_index;
    int _ir;
    int _ith;
    int _iz;
 
    std::vector<int> _input_variables;
    std::vector<int> _aux_variables;
 
private:
    IntraspeciesCyl& operator=(const IntraspeciesCyl& var) = delete;
    IntraspeciesCyl(const IntraspeciesCyl& var) = delete;
};
} // namespace five_moment
} // namespace apps
} // namespace wxm