Earlier today I finished trimming Hollie’s RRBS BS-seq FastQ data.
However, the original files were never analyzed with FastQC, so I ran it on the original files.
These libraries were originally created by Hollie Putnam using the TruSeq DNA Methylation Kit (Illumina):
FastQC was run, followed by MultiQC. Analysis was run on Roadrunner.
All analysis is documented in a Jupyter Notebook; see link below.
FastQC output folder:
MultiQC output folder:
MultiQC report (HTML):
from Sam’s Notebook https://ift.tt/2KvNoMM