6.5.5 markerdrop input file options
The statements below are optional for markerdrop; they are used
to indicate a change from the default order of trait values in the
pedigree file. The first statement may be included if marker data are
to be simulated conditional on a trait model and the second may be
included if data are to be simulated conditional on an inheritance
pattern.
input pedigree record traits K1 K2 K3 ... integers I1 I2 I3 ...
- Unless this statement is present, the first integer following gender, if
present, is assumed to be data for trait 1, the next integer for trait
2, and so on. Use this statement to specify an alternate correspondence
between integer values in the record and trait numbers.
input pedigree record traits K1 K2 ... integer pairs I11 I12 I21 I22 ...
-
Unless this statement is present, the first two integers following
gender, if present, in the pedigree file are assumed to be the
inheritance indicators at the locus for trait 1. The next two integers
are assumed to be the inheritance indicators at the locus for trait 2,
and so on.
This document was generated
by Elizabeth Thompson on September, 10 2010
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