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mSMCTransition

mSMCTransition[tree]
randomizes a mSMC transition {e0,t1,e1} on tree, where the recombation occurs on the branch e0, and the emerging branch coalesces on the branch e1 at time t1.
mSMCTransition[tree, els]
randomizes a mSMC transiton {e0,t1,e1} on tree, under the constraint that the branch on which the recombation occurs is randomly chosen among the branch list els,weighted by the branch length.
mSMCTransition[tree, e0]
randomizes a mSMC transiton {e0,t1,e1} on tree, under the constraint that the branch on which the recombation occurson the branch e0.
mSMCTransition[tree, {e0, -1, e1}]
randomizes a mSMC transiton {e0,t1,e1} on tree, under the constraint that the recombation occurs on the branch e0, and the emerging branch coalesces on the branch e1.