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Direct Random Mutagenesis of Gene-Sized
DNA Fragments Using Polymerase Chain Reaction |
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Analytical Biochemistry 224, 347-353 (1995) |
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Concentrations (mM) and error rates |
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E. (%) |
[dATP] |
[dCTP] |
[dGTP] |
[dTTP] |
[MnCl2] |
[MgCl2] |
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0.2 |
0.35 |
0.4 |
0.20 |
1.35 |
0.5 |
2.50 |
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0.3 |
0.20 |
0.2 |
0.18 |
1.26 |
0.5 |
2.04 |
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0.4 |
0.22 |
0.2 |
0.27 |
1.86 |
0.5 |
2.75 |
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0.5 |
0.22 |
0.2 |
0.34 |
2.36 |
0.5 |
3.32 |
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0.6 |
0.23 |
0.2 |
0.42 |
2.90 |
0.5 |
3.95 |
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0.8 |
0.23 |
0.2 |
0.57 |
4.00 |
0.5 |
5.20 |
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1.0 |
0.12 |
0.1 |
0.36 |
2.50 |
0.5 |
3.28 |
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1.5 |
0.12 |
0.1 |
0.55 |
3.85 |
0.5 |
4.82 |
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PCR Setup |
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amount in ul: |
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E. (%) |
H2O |
dATP |
dCTP |
dGTP |
dTTP |
Templ. |
Pri. |
BSA |
MgCl2 |
Buffer |
MnCl2 |
Enz. |
total |
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0.2 |
54.2 |
3.5 |
4.0 |
2.0 |
1.4 |
2 |
2 |
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10.0 |
10.0 |
10.0 |
1 |
100.0 |
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0.3 |
54.8 |
2.0 |
2.0 |
1.8 |
1.3 |
2 |
2 |
5 |
8.2 |
10.0 |
10.0 |
1 |
100.0 |
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0.4 |
50.2 |
2.2 |
2.0 |
2.7 |
1.9 |
2 |
2 |
5 |
11.0 |
10.0 |
10.0 |
1 |
100.0 |
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0.5 |
46.8 |
2.2 |
2.0 |
3.4 |
2.4 |
2 |
2 |
5 |
13.3 |
10.0 |
10.0 |
1 |
100.0 |
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0.6 |
42.8 |
2.3 |
2.0 |
4.2 |
2.9 |
2 |
2 |
5 |
15.8 |
10.0 |
10.0 |
1 |
100.0 |
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0.8 |
35.2 |
2.3 |
2.0 |
5.7 |
4.0 |
2 |
2 |
5 |
20.8 |
10.0 |
10.0 |
1 |
100.0 |
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1.0 |
48.6 |
1.2 |
1.0 |
3.6 |
2.5 |
2 |
2 |
5 |
13.1 |
10.0 |
10.0 |
1 |
100.0 |
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1.5 |
39.2 |
1.2 |
1.0 |
5.5 |
3.9 |
2 |
2 |
5 |
19.3 |
10.0 |
10.0 |
1 |
100.0 |
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E. (%) |
H2O |
dATP |
dCTP |
dGTP |
dTTP |
Templ. |
Pri. |
BSA |
MgCl2 |
Buffer |
MnCl2 |
Enz. |
total |
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stock solution conc. (mM) |
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dATP |
10 |
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dCTP |
10 |
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dGTP |
10 |
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dTTP |
100 |
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MnCl2 |
5 |
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MgCl2 |
25 |
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BSA |
0.1 |
ug/ul |
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Total Volume |
100 |
ul |
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